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1. Wasinger VC, Cordwell SJ, Cerpa-Poljak A, Yan JX, Gooley AA, Wilkins MR, Duncan MW, Harris R, Williams KL, Humphery-Smith I. Progress with gene-product mapping of the Mollicutes: Mycoplasma genitalium. Electrophoresis. (1995) 16, 1090-1094. 2. Banks RE, Dunn MJ, Hochstrasser DF, Sanchez JC, Blackstock W, Pappin DJ, Selby PJ. Proteomics: new perspectives, new biomedical opportunities. Lancet. (2000) 356, 1749-1756. 3. Hanash S. Disease proteomics. Nature. (2003) 422, 226-232. 4. Aebersold R, Mann M. Mass spectrometry-based proteomics. Nature. (2003) 422, 198-207. 5. Nelson DL, Cox MM. Lehninger Principles of Biochemistry, 4th edition. W. H. Freeman and Company, New York. (2005) 190-237. 6. Stone I. Eight Decades of Scurvy. The Case History of a Misleading Dietary Hypothesis. Orthomolecular Psychiatry. (1979) 8, 58-62. 7. Kidd D, Liu Y, Cravatt BF. Profiling serine hydrolase activities in complex proteomes. Biochemistry. (2001) 40, 4005-4015. 8. Kalafatis M, Egan JO, van 't Veer C, Cawthern KM, Mann KG. The regulation of clotting factors. Crit. Rev. Eukaryot. Gene Expr. (1997) 7, 241-280. 9. Clark JD, Schievella AR, Nalefski EA, Lin LL. Cytosolic phospholipase A2. J. Lipid Mediat. Cell Signal. (1995) 12, 83-117. 10. Mignatti P, Rifkin DB. Plasminogen activators and matrix metalloproteinases in angiogenesis. Enzyme Protein. (1996) 49, 117-137. 11. Yoshida S, Shiosaka S. Plasticity-related serine proteases in the brain (review). Int. J. Mol. Med. (1999) 3, 405-409. 12. Seidah NG, Chrétien M. Eukaryotic protein processing: endoproteolysis of precursor proteins. Curr. Opin. Biotechnol. (1997) 8, 602-607. 13. Smyth MJ, O'Connor MD, Trapani JA. Granzymes: a variety of serine protease specificities encoded by genetically distinct subfamilies. J. Leukoc. Biol. (1996) 60, 555-562. 14. Kato GJ. Human genetic diseases of proteolysis. Hum. Mutat. (1999) 13, 87-98. 15. DeClerck YA, Imren S, Montgomery AM, Mueller BM, Reisfeld RA, Laug WE. Proteases and protease inhibitors in tumor progression. Adv. Exp. Med. Biol. (1997) 425, 89-97. 16. Rehm BH. Polyester synthases: natural catalysts for plastics. Biochem. J. (2003) 376, 15-33. 17. Jendrossek D, Handrick R. Microbial degradation of poly- hydroxyalkanoates. Annu. Rev. Microbiol. (2002) 56, 403-432. 18. Tokiwa Y, Calabia BP. Degradation of microbial polyesters. Biotechnol. Lett. (2004) 26, 1181-1189. 19. Jendrossek D. Extracellular polyhydroxyalkanoate depolymerases: the key enzymes of PHA degradation, p. 41-83. (2002) In Y. Doi and A. Steinbüchel (ed.), Biopolymers, vol. 3b: polyesters II. Wiley-VCH, Weinheim, Germany. 20. Abe T, Kobayashi T, Saito T. Properties of a novel intracellular poly(3-hydroxybutyrate) depolymerase with high specific activity (PhaZd) in Wautersia eutropha H16. J. Bacteriol. (2005) 187, 6982-6990. 21. Saegusa H, Shiraki M, Kanai C, Saito T. Cloning of an intracellular Poly[D(-)-3-Hydroxybutyrate] depolymerase gene from Ralstonia eutropha H16 and characterization of the gene product. J. Bacteriol. (2001) 183, 94-100. 22. Tseng CL, Chen HJ, Shaw GC. Identification and characterization of the Bacillus thuringiensis phaZ gene, encoding new intracellular poly-3-hydroxybutyrate depolymerase. J. Bacteriol. (2006) 188, 7592-7599. 23. O'Farrell PH. High resolution two-dimensional electrophoresis of proteins. J. Biol. Chem. (1975) 250, 4007-4021. 24. Klose J. Protein mapping by combined isoelectric focusing and electrophoresis of mouse tissues. A novel approach to testing for induced point mutations in mammals. Humangenetik. (1975) 26, 231-243. 25. Jeffery DA, Bogyo M. Chemical proteomics and its application to drug discovery. Curr. Opin. Biotechnol. (2003) 14, 87-95. 26. Speers AE, Cravatt BF. Chemical strategies for activity-based proteomics. Chembiochem. (2004) 5:41-47. 27. Peeples ES, Schopfer LM, Duysen EG, Spaulding R, Voelker T, Thompson CM, Lockridge O. Albumin, a new biomarker of organophosphorus toxicant exposure, identified by mass spectrometry. Toxicol. Sci. (2005) 83, 303-312. 28. Abou-Donia MB. Organophosphorus ester-induced chronic neurotoxicity. Arch. Environ. Health. (2003) 58, 484-497. 29. Creighton, T. E. Proteins: Structure and Molecular Properties, 2nd Ed. Freeman, New York. (1993). 30. Walsh, C. T. Enzymatic Reaction Mechanisms. Freeman, New York. (1979). 31. Pineiro- Sanchez ML, Goldstein LA, Dodt J, Howard L, Yeh Y, Tran H, Argraves WS, Chen WT. Identification of the 170-kDa melanoma membrane-bound gelatinase (seprase) as a serine integral membrane protease. J. Biol. Chem. (1997) 272, 7595-7601. 32. Liu Y, Patricelli MP, Cravatt BF. Activity-based protein profiling: the serine hydrolases. Proc. Natl. Acad. Sci. U.S.A. (1999) 96, 14694-14699. 33. Schopfer LM, Champion MM, Tamblyn N, Thompson CM, Lockridge O. Characteristic mass spectral fragments of the organophosphorus agent FP-biotin and FP-biotinylated peptides from trypsin and bovine albumin (Tyr410). Anal. Biochem. (2005) 345, 122-132. 34. Chen SC, Chang YC, Lin CH, Lin CH, Liaw SH. Crystal structure of a bifunctional deaminase and reductase from Bacillus subtilis involved in riboflavin biosynthesis. J. Biol. Chem. (2006) 281, 7605-7613. 35. Richter G, Fischer M, Krieger C, Eberhardt S, Lüttgen H, Gerstenschläger I, Bacher A. Biosynthesis of riboflavin: characterization of the bifunctional deaminase-reductase of Escherichia coli and Bacillus subtilis. J. Bacteriol. (1997) 179, 2022-2028. 36. Schopfer LM, Voelker T, Bartels CF, Thompson CM, Lockridge O. Reaction kinetics of biotinylated organophosphorus toxicant, FP-biotin, with human acetylcholinesterase and human butyrylcholinesterase. Chem. Res. Toxicol. (2005) 18, 747-754. 37. Cravatt BF, Giang DK, Mayfield SP, Boger DL, Lerner RA, Gilula NB. Molecular characterization of an enzyme that degrades neuromodulatory fatty-acid amides. Nature. (1996) 384, 83-87. 38. Taylor P. The cholinesterases. J. Biol. Chem. (1991) 266, 4025-4028. 39. Steiner B. Profile of social work in inpatient elder care. Z Gerontol Geriatr. (1998) 31, 343-347. 40. Du H, Cameron TL, Garger SJ, Pogue GP, Hamm LA, White E, Hanley KM, Grabowski GA. Wolman disease/cholesteryl ester storage disease: efficacy of plant-produced human lysosomal acid lipase in mice. J. Lipid Res. (2008) 49, 1646-1657. 41. Jap TS, Jenq SF, Wu YC, Chiu CY, Cheng HM. Mutations in the lipoprotein lipase gene as a cause of hypertriglyceridemia and pancreatitis in Taiwan. Pancreas. (2003) 27, 122-126. 42. Madsen MA, Deryugina EI, Niessen S, Cravatt BF, Quigley JP. Activity-based protein profiling implicates urokinase activation as a key step in human fibrosarcoma intravasation. J. Biol. Chem. (2006) 281, 15997-16005. 43. Kim J, Yu W, Kovalski K, Ossowski L. Requirement for specific proteases in cancer cell intravasation as revealed by a novel semiquantitative PCR-based assay. Cell. (1998) 94, 353-362.
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