|
Altschul SF, Gish W, Miller W, Myers EW & Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403–410 Ando S, Ishikawa K, Ishida H, Kawarabayasi Y, Kikuchi H, Kosugi Y (1999) Thermostable aminopeptidase from Pyrococcus horikoshii. FEBS Lett 447: 25-28 Arica MY, Bayramoğlu G (2004) Reversible immobilization of tyrosinase onto polyethyleneimine-grafted and Cu(II) chelated poly(HEMA-co-GMA) reactive membranes. J Mol Catal B Enzym 27: 255-265 Ash C, Farrow JAE, Wallbanks S, Collins MD (1991) Phylogenetic heterogeneity of the genus Bacillus revealed by comparative analysis of small-subunit-ribosomal RNA sequences. Lett Appl Microbiol 13: 202-206 Artymjuk PJ, Grindley HM, Park JE, Rice DW, Willett P (1992) Three-dimensional structural resemblance between leucine aminopeptidase and carboxypeptidase A revealed by graph-theoretical techniques. FEBS Lett 303: 48-52 Bahar T, Celebi SS (1999) Immobilization of glucoamylase on magnetic poly(styrene) particles. J Appl Polym Sci 72: 69-73 Bairoch, A., Apweiler, R., Wu, C. H., Barker, W. C., Boeckmann, B., Ferro, S., Gasteiger, E., Huang, H., Lopez, R., Magrane, M. et al. (2005) The Universal Protein Resource (UniProt). Nucleic Acids Res. 33 (Database issue), D154– D159 Balcao VM, Paiva AL, Malcata FX (1996) Bioreactors with immobilized lipases: state of the art. Enzyme Microb Technol 18: 392-416 Barrett AJ, Rawlings ND, Woessner JF (1998) Introduction: metallopeptidases and their clans. In: Handbook of Proteolytic Enzymes, Academic Press, Lodon, pp. 989-991 Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N. and Bourne, P. E. (2000) The Protein Data Bank. Nucleic Acids Res. 28: 235–242 Bell G, Halling PJ, Moore BD, Partridge J, Rees DG (1995) Trends in Biotechnol 13: 468-473 Beguin P (1999) Hybrid enzymes. Curr Opin Biotechnol 10:336–340 Blandino A, Macías M, Cantero D(2000)Glucose oxidase release from calcium alginate gel capsules. Enzyme Microb Technol 27: 319-324 Bourne Y, Henrissat B (2001) Glycoside hydrolases and glycosyltransferases: families and functional modules. Curr Opin Struct Biol 11:593–600 Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254 Buchholz K, Kasche V (1997) Biokatalysatoren und enzymtechnologie. pp. 166-185, VCH. Bulow L, Mosbach K (1991) Multienzyme systems obtained by gene fusion. Trends Biotechnol 9:226–231 Burley SK, David PR, Sweet RM, Taylor A & Lipscomb WN (1992) Structure determination and refinement of bovine lens leucine aminopeptidase and its complex with bestatin. J Mol Biol 224: 113–140 Burley SK, David PR, Sweet RM, Taylor A, Lipscomb WN (1992) Structure determination of bovine lens leucine aminopeptidase and its complex with bestatin. J Mol Biol 224:113-140 Burley SK, Peter RD, Taylor A, Lipscomb WN (1990) Molecular structure of leucine aminopeptidase at 2.7-Å resolution. Proc Natl Acad Sci USA 87: 6878-6882 Burton SC, Harding DRK (1998) Salt-independent adsorption chromatography: new broad-spectrum affinity methods for protein capture. J Biochem Biophys Methods 49: 275-287 Cao L (2005) Immobilized enzymes: science or art? Curr Opin Chem Biol 9: 217-226 Carpenter FH, Vahl JM (1973) Leucine aminopeptidase (Bovine lens): mechanism of activation by Mg2+ and Mn2+ of the zinc metalloenzyme, amino acid composition, and sulfhydryl content. J Biol Chem 248: 294-304 Chang HY, Irwin PM, Nikolov ZL (1998) Effects of mutations in the starch-binding domain of Bacillus macerans cyclodextrin glycosyltransferase. J Biotechnol 65:191–202 Chao WS, Gu YQ, Pautot V, Bray EA, Walling LL (1999) Leucine aminopeptidase RNAs, proteins, and activities increase in response to water deficit, salinity and the wound signals- systenin, methyl jasmonate, and abscisic acid. Plant Physiol 120: 979-992 Chao WS, Pautot V, Holzer FM, Walling LL (2000) Leucine aminopeptidase: the ubiquity of LAP-N and the specificity of LAP-A. Planta 210: 563-573 Chaouk H, Hearn MTW (1999) New ligand, N-(2-pyridylmethyl)aminoacetate, for use in the immobilized metal ion affinity chromatographic separation of proteins. J Chromatogr A 852: 105-115 Chevrier B, Schalk C, D’Orchymont H, Rondeau JM, Moras D, Tarnus C (1994) Crystal structure of Aeromonas proteolytica aminopeptidase: a prototypical member of the co-catalytic zinc enzyme family. Structure 2: 283-291 Chien HCR, Lin LL, Chao SH, Chen CC, Wang WC, Shaw CY, Tsai YC, Hu HY, Hsu WH (2002) Purification, characterization, and genetic analysis of a leucine aminopeptidase from Aspergillus sojae. Biochim Biophys Acta 1576: 119-126 Chien, HR, Hsu, CL, Hu, HY, Wang, WC & Hsu, WH. (2002) Enhancing oxidative resistance of Agrobacterium radiobacter N-caramoyl D-amino acid amidohydrolase by engineering solvent-accessible methionine residues. Biochem Biophy Res Commun 297: 282-287 Chi MC, Chou WM, Hsu WH & Lin LL (2004) Identification of amino acid residues essential for the catalytic reaction of Bacillus kaustophilus leucine aminopeptidase. Biosci Biotechnol Biochem 68: 1784–1797 Chi MC, Chou WM, Wang CH, Chen W, Hsu WH, Lin LL, (2004) Generating oxidation-resistant variants of Bacillus kaustophilus leucine aminopeptidase by substitution of the critical methionine residues with leucine. Anotnie van Leeuwenhoek 86: 355-362 Chi MC, Huang HB, Liu JS, Wang WC, Liang WC, Lin LL (2006) Residues threonine 346 and leucine 352 are critical for the proper function of Bacillus kaustophilus leucine aminopeptidase. FEMS Microbiol Lett 260: 156-161 Ciolino HP, Levine RL (1997) Modification of proteins in endothelial cell death during oxidative stress. Free Radic Biol Med 22: 1277-1282 Compton LA & Johnson WC, Jr (1986) Analysis of protein circular dichroism spedtra for secondary structure using a simple matrix multiplication. Anal Biochem 155: 155-167 Cottrell GS, Hooper NM, Turner AJ (2000) Cloning, expression, and characterization of human cytosolic aminopeptidase P: a single manganese (II)-dependent enzyme. Biochemistry 39: 15121-15128 Dalmia BK, Nikolov ZL (1991) Characterization of glucoamylase adsorption to raw starch. Enzyme Microb Technol 13: 982–990 Dalmia, B. K. and Nikolov, Z. L. (1994) Characterization of a 刍-galactosidase fusion protein containing the starch-binding domain of Aspergillus glucoamylase. Enzyme Microb. Technol. 16: 18–23 Dalmia BK, Schütte K, Nikolov ZL (1995) Domain E of Bacillus macerans cyclodextrin glucanotransferase: an independent starch-binding domain. Biotechnol Bioeng 47:575-584 Dauter, Z., Dauter, M., Brzozowski, A. M., Christensen, S., Borchert, T. V., Beier, L., Wilson, K. S. and Davies, G. J.(1999)X-ray structure of Novamyl, the five-domain “maltogenic” 脉-amylase from Bacillus stearothermophilus: maltose and acarbose complexes at 1.7 Å resolution. Biochemistry 38: 8385-8392 de Cuyper M, Joniau M (1992) Binding characteristics and thermal behaviour of cytochrome c oxidase, inserted into phospholipid-coated, magnetic nanoparticles. Biotechnol Appl Biochem 16: 201-210 Doumèche B, Heinemann M, Büchs J, Hartmeier W, MB. Ansorge- Schumacher (2002) Enzymatic catalysis of gel-stabilized two-phase systems: improvement of the solvent phase. J Mol Catal B Enzym 18: 19-27 Emir S, Say R, Yavuz H, Denizli A (2004) A new metal chelate affinity adsorbent for cytochrome c. Biotechnol Prog 20: 223-228.E.R. Stadtman (1993) Oxidation of free amino acids and 1 amino acid residues in proteins by radiolysis and by metal-catalyzed reactions. Annu Rev Biochem 62: 797-821 Fang TY, Lin LL, Hsu WH (1994) Recovery of isoamylase from Pseudomonas amyloderamosa by adsorption–elution on raw starch. Enzyme Microb Technol 16:247–252 Farag AM, Hassan MA (2004) Purification, characterization, and immobilization of a keratinase from Aspergillus oryzae. Enzyme Microb Technol 34: 85-93 FitzGerald RJ, O’Cuinn G (2006) Enzymatic debittering of food hydrolysates. Biotechnol Adv 24: 234-237 Flora K, Brennan JD, Baker GA, Doody MA, Bright FV (1998) Unfolding of acrylodan-labeled human serum albumin probed by steady-state and time-resolved fluorescence methods. Biophys J 75:1084–1096 Fontes CM, Hazlewood GP, Morag E, Hall J, Hirst BH, Gilbert HJ (1995) Evidence for a general role for non-catalytic thermostabilizing domains in xylanases from thermophilic bacteria. Biochem J 307:151–158 Fothergill JE, Nairn RC (1961) Purification of fluorescent protein conjugates: comparison of charcoal and sephadex. Nature (London) 192: 1073-1074 Gao X, Yu KMK, Tam KY, Tsang SC (2003) Colloidal stable silica encapsulated nano-magnetic composite as a novel bio-catalyst carrier. Chem Commun 24: 2998-2999 Giacomelli CE, Norde W (2001) The adsorption-desorption cycle: reversibility of the BSA-silica system. J Colloid Interface Sci 233: 234–240 Girelli AM, Mattei J (2005) Application of immobilized enzyme reactor in on-line high performance liquid chromatography: a review. J Chromatogr B 819: 3-16 Goldberg AL, Cascio P, Saric T, Rock KL (2002) The importance of the proteasome and subsequent proteolytic steps in the generation of antigenic peptides. Mol Immunol 39: 147-164 Gonzales, T & Robert-Baudouy, J (1996) Bacterial aminopeptidases: properties and functions. FEMS Microbiol Rev 18, 319-344 Greenblatt HM, Almong O, Maras B, Spungin-Bialik A, Barra D, Blumberg S, Shoham G (1997) Streptomyces griseus aminopeptidase: X-ray crystallographic structure at 1.75 A resolution. J Mol Biol 265: 620-636 Greenwood JM, Gilkes NR, Kilburn DG, Miller RJ, Warren RA (1989) Fusion to an endoglucanase allows alkaline phosphatase to bind to cellulose. FEBS Lett 244:127–131 Gupta MN, Jain S, Roy I (2002) Immobilized metal affinity chromatography without chelating ligands: purification of soybean trypsin inhibitor on zinc alginate. Biotechnol Prog 18: 78-81 Gu YQ, Walling LL (2002) Identification of residues critical for activity of the wound-induced leucine aminopeptidase (LAP-A) of tomato. Eur J Biochem 269: 1630-1640 Haska N, Ohta Y (1992) Mechanism of hydrolysis of the treated sago starch granules by raw starch digesting amylases from Pencillium brunneum. Starch/Stärke 44:25–28 Heng PWS, Chan LW (2002) a Effect of aldehydes and methods of cross-linking on properties of calcium alginate microspheres prepared by emulsification. Biometerials 23: 1319-1326 Heng PWS, Chan LW, Jin Y (2002) b Cross-linking mechanisms of calcium and zinc in production of alginate microspheres. Intl J Pharm 242: 255-258 Heng PWS, Chan LW, Lee HY (2002) Production of alginate microspheres by internal gelation using an emulsification method. Intl J Pharm 242: 259-262 Hellman J, Mäntsä lä P (1992) Construction of an Escherichia coli export-affinity vector for expression and purification offo reign proteins by fusion to cyclomaltodextrin glucanotransferase. J Biotechnol 23:19–34 Herrera-Camacho I, Morales-Monterrosas R, Quiroz-Alvarez R (2000) Aminopeptidase yscCo-II: a new cobalt-dependent aminopeptidase from yeast. Yeast 16: 219-229 Himmelhoch SR (1969) Leucine aminopeptidase: a zinc metloenzyme. Arch Biochem Biophys 134: 597-602 Hochuli E, Dőbeli H, Schacher A (1987) New metal chelate adsorbents selective for proteins and peptides containing neighbouring histidine residues. J Chromatogr 411: 174-184 Huang HB., Chi MC, Hsu WH, Liang WC, Lin LL (2005) Construction and one-step purification of Bacillus kaustophilus leucine aminopeptidase fused to the starch-binding domain of Bacillus sp. strain TS-23 �-amylase. Bioprocess Biosyst Eng 27: 389-398 Hua YW, Chi MC, Lo HF, Hsu WH, Lin LL (2004) Fusion of Bacillus stearothermophilus leucine aminopeptidase II with the raw-starch-binding domain of Bacillus sp. strain TS-23 脉-amylase generates a chimeric enzyme with enhanced thermostability and catalytic activity. J Ind Microbiol Biotechnol 31:273–277 Hu HY, Hsu WH, Chien HR (2003) Characterization and phylogenetic analysis of a thermostable N-carbamoyl-L-amino acid amidohydrolase from Bacillus kaustophilus CCRC 11223. Arch Microbiol 179: 250-257 Hung CP, Lo HF, Hsu WH, Chen SC, Lin L L (2008) Immobilization of Escherichia coli novablue gamma-glutamyltranspeptidase in Ca-alginate-kappa- carrageenan beads. Appl Biochem Biotechnol 150:157-70 Jacks, A. J., Sorimachi, K., Le Gal-Coëffet, M. F., Williamson, G., Archer, D. B. and Williamson, M. P. (1995) 1H and 15N assignment and secondary structure of the starch-binding domain of glucoamylase from Aspergillus niger. Eur. J. Biochem. 233: 568–578. Janeček Š, Š evčĺ k J (1999) The evolution of starch-binding domain. FEBS Lett 456:119–125 Jiang W, Graham B, Spiccia L, Hearn MTW (1998) Protein selectivity with immobilized metal ion-tacn sorbents: chromatographic studies with human serum proteins and several other globular proteins. Anal Biochem 255: 47-58 Johnson RD, Todd RJ, Arnold FH (1996) Multipoint binding in metal-affinity chromatography II. Effect of pH and imidazole on chromatographic retention of engineered histidine-containing cytochromes c. J Chromatogr A 725: 225-235 Kamphuis J, Meijer EM, Boesten WHJ, QB , Broxterman, Kaptein B, Hermes HFM, Schoemaker HE(1992)Production of natural and synthetic L- and D-amino acids by aminopeptidases and amino amidases, in: J.D. Rozzell, F. Wagner (eds), Biocatalytic Production of Amino Acids and Derivatives, Wiley, New York, pp. 178-206 Kennedy JF, Meio EHM (1990) Immobilized biosystems in research and industry. Chem Eng Prog 86: 81-89 Knegtel, R. M., Wind, R.D., Rozeboom, H. J., Kalk, K. H., Buitelaar, R. M., ijkhuizen, L. and Dijkstra, B.W. (1996) Crystal structure at 2.3 Å resolution and revised nucleotide sequence of the thermostable cyclodextrin glycosyltransferase from Thermonanaerobacterium thermosulfurigenes EM1. J. Mol. Biol. 256: 611–622. Klein, C. and Schulz, G. E. (1991) Structure of cyclodextrin glycosyltransferase refined at 2.0 Å resolution. J. Mol.Biol. 217: 737-750 Kim H, Burley SK, Lipscomb WN (1993) Re-refinement of the X-ray crystal structure of bovine lens leucine aminopeptidase complexed with bestatin. J Mol Biol 230: 722-724 Kim H & Lipscomb WN (1993) Differentiation and identification of the two catalytic metal and binding sites in bovine lens leucine aminopeptidase by X-ray crystallography. Proc Natl Acad Sci USA 90: 5006–5010 Koneracká M, Kopčanský P, Timko M, Ramchand CN, de Sequeira A, Trevan M (2002) Direct binding procedure of proteins and enzymes to fine magnetic particles. J Mol Catal B Enzym 18: 13-18 Korecká L, Ježová J, Bilková Z, Beneš M, Horák D, Hradcová O, Slováková M, Viovy JL (2005) Magnetic enzyme reactors for isolation and study of heterogeneous glycoproteins. J Magn Magn Mater 293: 349-357 Kronina VV, Wirth HJ, Hearn MTW (1999) Characterization by immobilized metal ion affinity chromatographic procedures of the binding behavior of several synthetic peptides designed to have high affinity for Cu(II) ions. J Chromatogr A 852: 261-272 Kubota, M., Matsuura, Y., Sakai, S. and Katsube, Y. (1991) Molecular structure of B. stearothermophilus cyclodextrin glucanotransferase and analysis of substrate binding site. Denpun Kagaku 38: 141-146 Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (London) 227:680–685 Lawson CL, van Montfort R, Strokopytov B, Rozeboom HJ, Kalk KH, de Vries GE, Penninga D, Dijkhuizen L, Dijkstra BW (1994) Nucleotide sequence and X-ray structure of cyclodextrin glycosyltransferase from Bacillus circulans strain 251 in a maltose-dependent crystal form. J Mol Biol 236:590–600 Leckband D & Langer R (1991)An approach for the stable immobilization of proteins. Biotechnol Bioeng 37: 227-237 Le Gal-Coeffet MF, Jacks AJ, Sorimachi K, Williamson MP, Williamson G, Archer DB (1995) Expression in Aspergillus niger of the starch-binding domain of glucoamylase: comparison with the proteolytically produced starch-binding domain. Eur J Biochem 233:561–567 Le KD, Gilkes NR, Kilnurn DG, Miller RJ, Saddler JN, Warren RA (1994) A streptavidin-cellulose-binding domainfusion protein that binds biotinylated proteins to cellulose. Enzyme Microb Technol 16:496–500 Leloup VM, Colonna P, Ring SG (1991) 脉-Amylase adsorption on starch crystallites. Biotechnol Bioeng 38:127–134 Levy I, ShoseyovO(2002) Cellulose-binding domains: industrial and biotechnological application. Biotechnol Adv 20:191–213 Lin LL, Hsu WH, Chu WS (1997) A gene encoding for an 脉-amylase from thermophilic Bacillus sp. TS-23 and its expression in Escherichia coli. J Appl Microbiol 82:325–334 Lin LL, Hsu WH, Wu CP, Chi MC, Chou WM, Hu HY (2004) A thermostable leucine aminopeptidase from Bacillus kaustophilus CCRC 11223. Extremophiles. 8 :79-87 Lin LL, Lo HF, Chi MC, Ku KL (2003) Functional expression of the raw starch-binding domain of Bacillus sp. strain TS-23 脉-amylasein recombinant Escherichia coli. Starch/Staä rke 55:197-202 Lobley, A., Whitmore, L. &Wallace, BA (2002) DICHROWEB: an interactive website for the analysis of protein secondary structure from circular dichroism spectra. Bioinformatics 18: 211-212 Lo HF, Lin LL, Chiang WY, Chi MC, Hsu WH, Chang CT (2002) Deletion analysis of the C-terminal region of the aamylase of Bacillus sp. strain TS-23. Arch Microbiol 178:115-123 Lo, H. F., Chiang, W. Y., Chi, M. C., Hu, H. Y. and Lin, L. L. (2004) Site-directed mutagenesis of the conserved threonine, tryptophan, and lysine residues in the starch-binding domain of Bacillus sp. strain TS-23 脉-amylase. Curr. Microbiol. 48: 280–284 Longo MA, Novella IS, Garcia LA, Diaz M(1992)Diffusion of proteiases in calcium alginate beads. Enzyme Microb Technol 14: 586-590 Lowther WT, Matthews BW (2002) Metalloaminopeptidases: common functional themes in disparate structural surroundings. Chem Rev 102: 4581-4607 Machovič M, Janeček Š (2002) Starch-binding domains in the post-genome era. Cell Mol Life Sci 63: 2710-2724 Manavalan P & Johnson WCJr (1987) Variable selection method improves the prediction of protein secondary structure from circular dichroism spectra. Anal Biochem 167: 76-85 Malcata FXH, Reyes R, Garcia HS, Hill CG jr, Amundson CH (1997) Kinetics and mechanisms of reactions catalysed by immobilized lipases. Enzyme Microb Technol 14: 426-446 McCulloch R, Burke ME, Sherratt DJ (1994) Peptidase activity of Escherichia coli aminopeptidase A is not required for its role in Xer site-specific recombination. Mol Microbiol 12: 241-251 Medda S, Saha BC, Ueda S (1982) Raw starch adsorption and elution behavior of glucoamylase I of black Aspergillus. J Ferment Technol 60:261–264 Melbye SW & Carpenter FH (1971) Leucine aminopeptidase (bovine lens): stability and size of subunits. J Biol Chem 246: 2459–2463 Merkel JR, Traganza ED, Mukherjee BB, Griffin TB, Prescott N (1964) Proteolytic activity and general characteristics of a marine bacterium, Aeromonas proteolytica sp. N. J Bacteriol 87: 1227-1233 Minton NP, Atkinson T, Bruton CJ, Sherwood RF (1984) The complete nucleotide sequence of the Pseudomonas gene coding for carboxypeptidase G2. Gene 31: 31-38 Mikami, B., Iwamoto, H., Malle, D., Yoon, H. J., Demirkan Sarikaya, E., Mezaki, Y. and Katsuya, Y. (2006) Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site. J. Mol. Biol. 359: 690–707 Mittal A, Khurana S, Singh H, Kamboj RC (2005) Characterization of dipeptidylpeptidase IV (DPP IV) immobilized in Ca alginate beads. Enzyme Microb Technol 37: 318-323 Mondal K, Mehta P, Mehta BR, Varandani D, Gupta MN (2006) A bioconjugate of Pseudomonas cepacia lipase with alginate with enhanced catalytic efficiency. Biochim Biophys Acta 1764: 1080-1086 Moraes LMP, Astolfi-filho S, Oliver SG (1995) Development of yeast strains for the efficient utilization of starch: evaluation of constructs that express 脉-amylase and glucoamylase separately or as bifunctional fusion proteins. Appl Microbiol Biotechnol 43:1067–1076 Morty RE, Morehead J (2002) Cloning and characterization of a leucyl aminopeptidase from three pathogenic Leishmania species. J Biol Chem 277: 26057-26065 Müller H, Strom A, Hunsmann G, Stuke AW (2005) Separation of native prion protein (PrP) glycoforms by copper-binding using immobilized metal affinity chromatography (IMAC). Biochem J 388: 371-378 Munjal N, Sawhney SK (2002) Stability and properties of mushroom tyrosinase entrapped in alginate, polyacrylamide and gelatin gels. Enzyme Microb Technol 30: 613-619 Nilsson J, Stahl S, Lundeberg J, Uhen M, Nygren PA (1997) Affinity fusion strategies for detection, purification, and immobilization of recombinant proteins. Protein Expr Purif 11:1–16 Nixon AE, Ostermeier M, Benkovic SJ (1998) Hybrid enzymes:manipulating enzyme design. Trends Biotechnol 16:258–264 Ohdan K, Kuriki T, Takata H, Kaneko H, Okada S (2000) Introducing of raw starch-binding domain into Bacillus subtilis 脉-amylase by fusion with the starch-binding domain of glucanotransferase. Appl Environ Microbiol 66:3058–3064 Olins PO, Lee SC (1993) Recent advances in heterologous gene expression in Escherichia coli. Curr Opin Biotechnol 4: 520-525 Palmieri G, Giardina P, Desiderio B, Morzullo L, Giamberini M, Sannia G (1994) A new enzyme immobilization procedure using copper alginate gel: application to a fungal phenol oxidase. Enzyme Microb Technol 16: 151-158 Persichetti RA, Clair NLS, Griffith JP, Navia MA, Margolin AL (1995) Cross-linked enzyme crystals (CLECs) of thermolysin in the synthesis of peptides. J Am Chem Soc 117: 2732-2737 Puri M, Marwaha SS, Kothari RM (1996) Studies on the applicability of alginate-entrapped naringinase for the debittering of kinnow juice. Enzyme Microb Technol 18: 281-285 Provencher SW & Glockner J (1981) Estimation of globular protein secondary structure from circular dichroism. Biochemistry 20:33-37 Rainey FA, Fritze D, Stackebrandt E (1994) The phylogenetic diversity of thermophilic membranes of the genus Bacillus as revealed by 16S rDNA analysis. FEMS Microbiol Lett 115: 205-211 Raksakulthai R, Haard NF (2003) Exopeptidases and their application to reduce bitterness in food: a review. Crit Rev Food Sci Nutr 43: 401-445 Ramirez C, Fung J, Miller RCJ, Warren RAJ, Kilburn DG (1993) A bifunctional affinity linker to couple antibodies to cellulose. Bio/Technology 11:1570–1573 Rao MB, Tanksale AM, Ghatge MS, Desphange VV (1998) Molecular and biotechnological aspects of microbial proteases. Microbiol Mol Biol Rev 62: 597-635 Riedel K, Ritter J, Bauer S, Bronnenmeier K (1998) The modular cellulase CelZ of the thermophilic bacterium Clostridium stercorarium contains a thermostabilizing domain. FEMS Microbiol Lett 164:261–267 Rowsell S, Pauptit RA, Tucker AD, Melton RG, Blow DM, Brick P (1997) Crystal structure of carboxypeptidase G2, a bacterial enzyme with applications in cancer therapy. Structure 5: 337-347 Rossi IM, Quach AD, Rosenzweig Z (2004) Glucose oxidase-magnetite nanoparticle bioconjugate for glucose sensing. Anal Bioanal Chem 380: 606-613 Roy I, Sharma S, Gupta MN (2004) Smart biocatalysts: design and applications. Adv Biochem Eng Biotechnol 86:159-189 Saha BC, Lecureux LW, Zeikus JG (1988) Raw starch adsorption- desorption purification of a thermostable b-amylase from Clostridium thermosulfurogenes. Anal Biochem 175:569–572 Saha BC, Ueda S (1983) Raw starch adsorption, elution, and digestion behavior of glucoamylase of Rhizopus niveus. J Ferment Technol 61:67–72 Şahin F, Demirel G, Tűmtűrk H (2005) A novel matrix for the immobilization of acetylcholinesterase. Intl J Biol Macromol 37: 148-153 Salemuddin M (1999) Bioaffinity based immobilization of enzymes. In: Fiechter A, editor. Advances in Biochemical Engineering/Biotechnology, Springer-Verlad: Berlin, vol 64, p 203-226 Sambrook J, Russell DW (2001) Molecular Cloning: A Laboratory Manual, 3rd edn. pp. 1.31-1.125. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York Sarder M, Roy I., Gupta MN (2003) A smart bioconjugate of alginate and pectinase with unusual biological activity toward chitosan. Biotechnol Prog 19: 1654-1658 Schuck P (2000) Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling. Biophys J 78: 1606-1619 Schuck P, Perugini MA, Gonzales NR, Howlett GJ, Schubert D (2002) Size-distbution analysis pf proteins by analytical ultracentrifugation: strategies and application to model systems. Biophys J 82: 1096-1111 Sharp RJ, Riley PW, White D (1992) Heterotrophic thermophilic Bacilli. In: Thermophilic Bacteria (Kristjansson JK ed), CRC Press, Boca Raton, Florida, pp. 19-50 Shibuya T, Tamura G, Shima H, Ishikawa T, Hara S (1992) Construction of an 脉-amylase/glucoamylase fusion gene and its expression in Saccharomyces cerevisiae. Biosci Biotechnol Biochem 56:884–889 Sahin F, Demirel G, Tümtürk H (2005) A novel matrix for the immobilization of acetylcholinesterase. Int J Biol Macro. 37 (3): 148-153 Shpigel E, Goldlust A, Eshel A, Ber IK, Efroni G, Singer Y, Levy I, Dekel M, Shoseyov O (2000) Expression, purification and applications of staphylococcal protein A fused to cellulosebinding domain. Biotechnol Appl Biochem 31:197–203 Simpson PJ, Xie H, Bolam DN, Gilbert HJ, Williamson MP (2000) The structural basis for the ligand specificity of family 2 carbohydrate-binding modules. J Biol Chem 275:41137-41142 Smidsrod O, Skjak-Braek G (1990) Alginate as immobilization matrix for cells. Trends Biotechnol. 8: 71-78 Smith DB, Johnson KS (1988) Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase. Gene 67:31–40 Sorimachi K, Jacks AJ, Le Gal-Coeffet MF, Williamson G, Archer DB, Williamson MP (1996) Solution structure of the granular starch-binding domain of glucoamylase from Aspergillus niger by nuclear magnetic resonance spectroscopy. J Mol Biol 259:970–987 Sorimachi K, LeGal-Coceffet MF, Williamson G, Archer DB, Williamson MP (1997) Solution structure of the granular starch binding domain of Aspergilus niger glucoamylase bound to 刍-cyclodextrin. Structure 5: 647-661 Sreenath HK (1992) Study on starch granules digestion by 脉-amylase. Starch/Stärke 44:61–63 Sreerama N, Woody RW (2000) Estimation of protein secondary structure from CD spectra: Comparison of CONTIN, SELCON and CDSSTR methods with an expanded reference set. Anal Biochem287: 252-260 Sreerama N, Venyaminov SY, Woody RW (1999) Estimation of the number of helical and strand segments in proteins using CD spectroscopy. Proteins Sci 8: 370-380 Sreerama N, Venyaminov SY, Woody RW (2000) Estimation of protein secondary structure from CD spectra: Inclusion of denatured proteins with native protein in the analysis. Anal Biochem 287: 241-251 Stadtman ER (1986) Oxidation of proteins by mixed-function oxidation systems: implication in protein turnover, aging and neutrophil. Trends Biochem Sci 11: 11-12 Stirling CJ, Colloms SD, Collins JF, Szatmari G, Sherratt DJ (1989) xerB, an Escherichia coli gene required for plasmid ColE1 site-specific recombination, is identical to PepA, encoding aminopeptidase A, a protein with substantial similarity to bovine lens leucine aminopeptidase. EMBO J 8:1623-1627 Stoll E, Weder HG, Zuber H (1976) Aminopeptidase II from Bacillus stearothermophilus. Biochim Biophys Acta 438: 212-220 Sträter N, Lipscomb WN (1995a) Two-metal ion mechanism of bovine lens leucine aminopeptidase: active site solvent structure and binding mode of L-leucinal, a gem-diolate transition state analogue, by X-ray crystallography. Biochemistry 34: 14792-14800 Sträter N, Lipscomb WN (1995b) Transition state analogue L-leucinephosphonic acid bound to bovine lens leucine aminopeptidase: X-ray structure at 1.65 Å resolution in a new crystal form. Biochemistry 34: 9200-9210 Sträter N & Lipscomb WN (1998) Leucyl aminopeptidase (animal and plant). Handbook of Proteolytic Enzymes (Barrett AJ, Rawlings ND &Woessner JF, eds), pp. 1384–1389. Academic Press, New York Sträter N, Sherratt DJ, Colloms DS (1999) X-ray structure of aminopeptidase A from Escherichia coli and a model for the nucleoprotein complex in Xer site-specific recombination. The EMBO J 18: 4513-4522 Sträter N, Sun L, Kantrowitz ER & Lipscomb WN (1999) A bicarbonate ion as a general base in the mechanism of peptide hydrolysis by zinc leucine aminopeptidase. Proc Natl Acad Sci USA 96: 11151–11155 Svensson B, Jesperson H, Sierks MR, MacGregor EA (1989) Sequence homology between putative raw starch-binding domains from different starch-degrading enzymes. Biochem J 264:309–311 Swillens S (1995) Interpretation of binding curves obtained with high receptor concentrations: practical aid for computer analysis. Mol Pharmacol 47:1197–1203 Taylor A, Daims M, Lee J, Surgenor T (1982) Identification and quantification of leucine aminopeptidase in aged normal and cataractous human lens and ability of bovine lens LAP to cleave bovine crystalline. Eye Res. 2: 47-56 Taylor A, Sanford D & Nowell T (1996) Structure and function of bovine lens aminopeptidase and comparison with homologous aminopeptidases. Aminopeptidases (Taylor A, ed), pp. 174–219. R.G. Landes Co., Austin, TX Terenius L, Sandin J & Sakurada T (2000) Nociceptin/orphanin FQ metabolism and bioactive metabolites. Peptides 21: 919–922 Terpe K (2003) Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol 60:523–533 Tischer W, Kasche V (1999) Immobilized enzymes: crystals or carriers? Trends Biotechnol 17: 326-335 Toldrá, F, Aristoy, AC & Flores, M (2000) Contribution of muscle aminopeptidases to flavor development in dry-cured ham. Food Research International 33: 181-185 Tsuchiya K, Nagashima T, Yamamoto Y, Gomi K, Kitamoto K, Kumagai C, Tamura G (1994) High level secretion of calf chymosin using a glucoamylase-prochymosin fusion gene in Aspergillus oryzae. Biosci Biotechnol Biochem 58:895–899 Tsuji SY, Wu N, Khosla C (2001) Intermodular communicationin polykeyide synthases: comparing the role of proteinproteininteractions to those in other multidomain proteins. Biochemistry 40:2317–2325 Tümtürk H, Sahin F, Demirel G (2007) A new method for immobilization of acetylcholinesterase. Bioprocess Biosyst Eng 30(2): 141-145 Vaillant F, Millan A, Millan P, Dornier M, Decloux M, Reynes M (2000) Co-immobilized pectinlyase and endocellulase on chitin and nylon supports. Process Biochem 35: 989-996 Van Stokkum IHM, Spoelder HJW, Bloemendal M, Van Grondelle R, Groen FCA (1990) Estimation of protein secondary structure and error analysis from CD spectra. Anal Biochem 191:110-118 van Wart HE, Lin SH (1981) Metal binding stoichiometry and mechanism of metal ion modulation of the activity of porcine kidney leucine aminopeptidase. Biochemistry 20: 5682-5689 Verlan AR, Sansen W, Van Loey A, Hndrickx M (1996) Covalent enzyme immobilization on paramagnetic polyacrolein beads. Biosensors and Bioelectronics 11: 443-448 Vieille C, Burdette DS, Zeikus JG (1996) Thermozymes. Biotechnol Annu Rev 2: 1-83 Vogt VM (1970) Purification and properties of an aminopeptidase from Escherichia coli. J Biol Chem 245: 4760-4769 Vosbeck KD, Chow KF, Awad Jr. WM (1973) The proteolytic enzymes of the K-1 strain of Streptomyces griseus obtained from a commercial preparation (Pronase): purification and characterization of the aminopeptidases. J Biol Chem 248: 6029-6034 Wouters MA, Husain A (2001) Changes of zinc ligation promote ling of the active site in the zinc hydrolyase superfamily. J Mol Biol 314: 1191-1207 Wallace AC, Laskowski RA &Thornton JM (1995) LIGPLOT: a program to generate schematic diagrams of protein - ligand interactions. Protein Eng 8: 127–134 Whitmore L, Wallace BA (2004) DICHROWEB: an online server for protein secondary structure analyses from circular dichroism spectroscopic data. Nucleic Acids Res. 32:668-673 Wind RD, Butteaar RM, Dijkhuizen L (1998) Engineering of factors determining 脉-amylase and cyclodextrin glycosyltransferase specificity in the cyclodextrin glycosyltransferase from Thermoanaerobacterium thermosulfurigenes EM1. Eur J Biochem 253:598–605 Wu CL, Chen YP, Lo HF, Lin LL (2008) Characterization of lysine-tagged Bacillus stearothermophilus leucine aminopeptidase II immobilized onto carboxylated gold nanoparticles. J Mol Catal B Enzym 54: 83-89 Yahşi A, Şahin F, Demirel G, Tűmtűrk H (2005) Binary immobilization of tyrosinase by using alginate gel beads and poly (acrylamide-co-acrylic acid) hydrogels. Intl J Biol Macromol 36: 253-258 Yip TT, Hutchens TW (1994) Immobilized metal ion affinity chromatography. Mol Biotechnol 1: 151-164 Zhu H, Srivastava R, Brown JQ, McShane MJ (2005) Combined physical and chemical immobilization of glucose oxidase in alginate microspheres improves stability of encapsulation and activity. Bioconjugate Chem 161: 451-1458
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