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柒、參考文獻 Aizawa, S.-I. (1996). Flagellar assembly in Salmonella typhimurium. Mol. Microbiol. 19:1-5. Arora, S. K., Ritchings, B. W., Almira, E. C., Lory, S. and Ramphal, R. (1998). The Pseudomonas aeruginosa flagellar cap protein, FliD, is responsible for mucin adhesion. Infect. Immun. 66:1000-1007. Arora, S. K., Ritchings, B. W., Almira, E. C., Lory S. and Ramphal, R. (1997). A transcriptional activator, FleQ, regulates mucin adhesion and flagellar gene expression in Pseudomonas aeruginosa in a cascade manner. J. Bacteriol. 179:5574-5581.
Barrios, H., Valderrama, B. and Morett, E. (1999). Compilation and analysis of σ54-dependent promoter sequences. Nucleic Acids Res. 27:4305-4313.
Becker, A., Katzen, F., Puhler, A. and Ielpi, L. (1998). Xanthan gum biosynthesis and application: a biochemical/genetic perspective. Appl. Microbiol. Biotechnol. 50:145-152.
Birnboim, H.C. and Doly, J. (1979). A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7:1513-1523.
Blin, N. and Stafford, D. W. (1976). A general method for isolation of high molecular weight DNA from eukaryotes. Nucleic Acids Res. 3:2303-2308.
Buck, M., Gallegos, MT., Studholme, DJ., Guo, Y. and Gralla, JD. (2000). The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor. J. Bacteriol. 182:4129-36.
Chan, J. W. Y. F. and Goodwin, P. H. (1999). The molecular genetics of virulence of Xanthomonas campestris. Biotechnol Adv. 17:489-508.
Cohen, S. N., Chang, A.C. and Hsu, L. (1972). Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA. Proc. Natl. Acad. Sci. 69:2110-2114.
Daniels, M. J., Barber, C. E., Turner, P. C., Cleary, W. G. and Sawczyc, M. K. (1984). Isolation of mutants of Xanthomonas campestris showing altered pathogenicity. Microbiology 130:2447-2455.
Dasgupta, N. and Ramphal, R. (2001). Interaction of the antiactivator FleN with the transcriptional activator FleQ regulates flagellar number in Pseudomonas aeruginosa. J. Bacteriol. 183:6636-44.
Dasgupta, N., Arora, S. K. and Ramphal, R. (2000). fleN, a gene that regulates flagellar number in Pseudomonas aeruginosa. J. Bacteriol. 182:357-364.
Dasgupta, N., Ferrell, E. P., Kanack, k. J., West, S. E. and Ramphal, R. (2002). fleQ, the gene encoding the major flagellar regulator of Pseudomonas aeruginosa, is sigma70 dependent and is downregulated by Vfr, a homolog of Escherichia coli cyclic AMP receptor protein. J. Bacteriol. 184:5240-50.
da Silva, A. C., Ferro J. A., Reinach, F. C., Farah, C. S., Furlan, L. R., Quaggio, R. B, Monteiro- Vitorello, C. B., Van Sluys, M. A., Almeida, N. F., Alves, L. M., do Amaral, A. M., Bertolini, M. C., Camargo, L. E., Camarotte, G., Cannavan, F., Cardozo, J., Chambergo, F., Ciapina, L. P., Cicarelli, R. M., Coutinho, L. L., Cursino-Santos, J. R., El-Dorry, H., Faria, J. B., Ferreira, A. J., Ferreira, R. C., Ferro, M. I., Formighieri, E. F., Franco, M. C., Greggio, C. C., Gruber, A., Katsuyama, A. M., Kishi, L. T., Leite, R. P., Lemos, E. G., Lemos, M. V., Locali, E. C., Machado, M. A., Madeira, A. M., Martinez-Rossi, N. M., Martins, E. C., Meidanis, J., Menck, C. F., Miyaki, C. Y., Moon, D. H., Moreira, L. M., Novo, M. T., Okura. V. K., Oliveira, M. C., Oliveira, V. R., Pereira, H. A., Rossi, A., Sena, J. A., Silva, C., de Souza, R. F., Spinola, L. A., Takita, M. A., Tamura, R. E., Teixeira, E. C., Tezza, R. I., Trindade dos Santos, M., Truffi, D., Tsai, S. M., White, F. F., Setubal, J. C. and Kitajima, J. P. (2002).Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. Nature 417:459-63.
Dasgupta, N., Wolfgang, M. C., Goodman, A. L., Arora, S. K., Jyot, J., Lory, S. and Ramphal, R. (2003). A four-tired transcriptional regulatory circuit controls flagllar biogenesis in Pseudomonas aeruginosa. Mol. Microbiol. 50:809-824.
Eisenstark, A. (1967). Bacteriophage technoques. In Methods in Viology, vol. 1, pp.449-524. Edited by K. Maramorosch and H. Koprowski. New York: Academic Press.
Genschik, P., Drabikowski, K. and Filipowicz, W. (1998). Characterization of the Escherichia coli RNA 3'-terminal phosphate cyclase and its σ54-regulated operon. J. Biol. Chem. 273:25516-25526.
Horns, T. and Bonas, U. (1996). The rpoN gene of Xanthomonas campestris pv.vesicatoria is not required for pathogenicity. Mol Plant Microbe Interact. 9:856-9.
Jacobi, S., Schade, R. and Heuner, K. (2004). Characterization of the alternative sigma factor sigma54 and the transcriptional regulator FleQ of Legionella pneumophila, which are both involved in the regulation cascade of flagellar gene expression. J. Bacteriol. 186:2540-7. . Jeevan, J., Dasgupta, N. and Ramphal, R. (2002). FleQ, the major flagellar gene regulator in Pseudomonas aeruginosa, binds to enhancer sites located either upstream or atypically downstream of the RpoN Binding site. J. Bacteriol. 184:5251-5260.
Jin, S., Ishimoto, K. and Lory, S. (1994). Nucleotide sequence of the rpoN gene and characterization of two downstream open reading frames in Pseudomonas aeruginosa. J. Bacteriol. 176:1316-22.
Keseler, I. M. and Kaiser, D. (1997). 54, a vital protein for Myxococcus xanthus. Proc. Natl. Acad. Sci. 94:1979-1984.
Kirsch, M. L., Carpenter, P. B. and Ordal, G. W.. (1994). A putative ATP-binding protein from the che/fla locus of Bacillus subtilis. DNA Sequence. 4:217-275.
Kullik, I., Fritsche, S., Knobel, H., Sanjuan, J., Hennecke, H. and Fischer, H. M. (1991). Bradyrhizobium japonicum has two differentially regulated, functional homologs of the σ54 gene (rpoN). J. Bacteriol. 173:1125-1138.
Michiels, J., Moris, M., Dombrecht, B., Verreth, C. and Vanderleyden, J. (1998). Differential regulation of Rhizobium etli rpoN2 gene expression during symbiosis and free-living growth. J. Bacteriol. 180:3620-3628.
Miller, J. H. (1972). Experiments in molecular genetics. Cold Spring Habor Laboratory, Cold Spring Harbor, N. Y.
Minamino, T. and Macnab, R. M. (1999). Components of the Salmonella flagellar export apparatus and classification of export substrates. J. Bacteriol. 181:1388-1394.
Moens, S. and Vanderleyden, J. (1996). Functions of bacterial flagella. Crit. Rev. Microbiol. 22:67-100.
O'Toole, G. A. and Kolter, R. (1998). Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development. Mol. Microbiol. 30:295-304.
Ottemann, K. M. and Miller, J. F. (1997). Roles of motility in bacterial-host interactions. Mol. Microbiol. 24:1109-1117.
Reitzer, L. and Schneider, B. L. (2001). Metabolic context and possible physiological themes of sigma(54)-dependent genes in Escherichia coli. Microbiol Mol Biol Rev. 65:422-44.
Ritchings, B. W., Almira, E. C., Lory, S. and Ramphal, R. (1995). Cloning and phenotypic characterization of fleS and fleR, new response regulators of Pseudomonas aeruginosa which regulate motility and adhesion to mucin. Infect. Immun. 63:4868-4876.
Pratt, L. A. and Kolter, R. (1998). Genetic analysis of Escherichia coli biofilm formation: defining the roles of flagella, motility, chemotaxis and type I pili. Mol. Microbiol. 30:285-293.
Ramakrishnan, G., Zhao, J. and Newton, A. (1994). Multiple structural proteins are required for both transcriptional activation and negative autoregulation of Caulobacter crescentus flagellar genes. J. Bacteriol. 176:7587-7600.
Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989). Molecular Cloning: a laboratory manual, 2nd. Cold Spring Habor Press, Cold Spring Harbor, N. Y.
Studholme, D. J. and Dixon, R. (2003). Domain Architectures of 54-Dependent Transcriptional Activators. J. Bacteriol. 185:1757-1767. Studholme, D. J. and Dixon, R. (2004). In silico analysis of the 54-dependent enhancer-binding proteins in Pirellula species strain 1. FEMS Microbiol Lett. 230:215-25.
Vieira, J. and Messing, J. (1991). New pUC-derived cloning vectors with different selectable markers and DNA replication origins. Gene. 100:189-194.
Wang, T. W. and Tseng, Y. H. (1992). Electrotransformation of Xanthomonas campestris by RF DNA of filamentous phage Lf. Lett. Appl. Microbiol. 14:65-68.
Weiner, L., Brissette, J. L. and Model, P. (1991). Stress-induced expression of the Escherichia coli phage shock protein operon is dependent on σ54 and modulated by positive and negative feedback mechanisms. Genes Dev. 5:1912-1923.
Williams, P. H. (1980). Black rot: a continuing treat to world crucifers. Plant Dis. 64:736-742.
Wu, J. and Newton, A. (1997). Regulation of the Caulabacter flagellar gene hierarchy; not just for motility. Mol. Microbiol. 24:233-239.
Xu, H. and Hoover, T. R. (2001). Transcriptional regulation at a distance in bacteria. Curr. Opin. Microbiol. 4:138-44.
Yang, M. H. (1997). Cloning and analysis of the promoter regions of filamentous phage Lf. Master thesis, National Chung Hsing University.
Yang, S. H. (2004) The study of regulatory protein, FleQ in Xanthomonas campestris pv. campestris (已發表).
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