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研究生:林宜穎
研究生(外文):Yi-Ying Lin
論文名稱:建立 Rhizopus oryzae 之轉形及基因表現系統
論文名稱(外文):Establishment of transformation and expression system for Rhizopus oryzae
指導教授:許文輝許文輝引用關係
口試委員:鄭隨和林榮流李佳音楊武勇
口試日期:2006-07-25
學位類別:碩士
校院名稱:國立中興大學
系所名稱:分子生物學研究所
學門:生命科學學門
學類:生物科技學類
論文種類:學術論文
論文出版年:2006
畢業學年度:94
語文別:中文
論文頁數:77
中文關鍵詞:轉形真菌
外文關鍵詞:transformationRhizopus oryzae
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R. oryzae 為一種絲狀真菌,由於生長快速,且具有高效率蛋白質外分泌系統,因此常被使用來生產工業用酵素。本研究主要的目的是建立 R. oryzae 轉形及基因表現系統,以利於產生同源或異源性蛋白質。此系統利用 uracil營養要求變異株 R. oryzae pyrG- 及來自 R. oryzae BCRC31837 的 pyrG 基因作為篩選標誌,並成功利用Novezyme 234、Yatalase、chitinase RS及chitosanase建立R. oryzae 原生質體的製備方法。將 Aspergillus oryzae NCHU1002 leucine aminopeptidase (LAP)基因選殖入Escherichia coli-R. oryzae穿梭載體並以 α-amylase 及 3-phosphoglycerate kinase (pgk)、glucoamylase (gla)和 aspartic protease啟動子控制基因表現,這些穿梭載體以PEG方法轉形入 R. oryzae pyrG-,得到轉形株 R. oryzae pyrG- (pamyP-lap)-1、R. oryzae pyrG- (ppgkP-lap)-1、R. oryzae pyrG- (pglaP-lap)-6及R. oryzae pyrG- (pAP-lap)-1,其最高的 LAP 活性分別為34.2mU/ml、 82.4mU/ml、 152.4mU/ml 及15.2mU/ml。利用南方墨點雜交法分析,發現轉形株 R. oryzae pyrG- 所攜帶 pamyP-lap、ppgkP-lap、pglaP-lap及pAP-lap質體都是以游離的狀態存在。
Rhizopus oryzae is a filamentous fungus which grow rapidly and secret a large amount of various enzymes extracellularly. This fungus has been used in the production of industrial enzymes. To develop transformation and expression systems for the production of homologous and heterologous proteins by R. oryzae, a uracil-auxotrophic mutant, R. oryzae pyrG- , was used as host cell, and a pyrG gene cloned from R. oryzae BCRC31837 was used as selectable marker. An efficient method for the preparation of R. oryzae protoplast was also established by using four lytic enzymes in combination. Aspergillus oryzae NCHU1002 lap gene was cloned into Escherichia coli-R. oryzae shuttle vector under the control of α-amylase, 3-phosphoglycerate kinase(pgk), glucoamylase (gla) or aspartic protease promoter. The recombinant plasmids were introduced into R. oryzae pyrG- by CaCl2/PEG transformation method. The LAP activities in the transformants harboring pamyP-lap, ppgkP-lap, pglaP-lap or pAP-lap can reach 34.2mU/ml, 82.4mU/ml, 152.4mU/ml, and 15.2mU/ml, respectively. Southern blot analysis indicated that pamyP-lap, ppgkP-lap, pglaP-lap and pAP-lap existed as episomal form in R. oryzae pyrG- cells.
中文摘要------------------------------------------------1
英文摘要------------------------------------------------2
前言---------------------------------------------------10
材料方法
一. 藥品------------------------------------------15
二. 菌株、質體------------------------------------15
三. LAP 之活性測試--------------------------------15
四. R.oryzae 基因轉形之建立-----------------------16
結果
一.R.oryzae轉形系統之建立---------------------------22
(一)篩選標誌------------------------------------22
(二)原生質體的再生------------------------------23
(三)R.oryzae 的轉形-----------------------------23
二.表現 lap 基因載體之構築及 R.oryzae 之轉形--------24
(一)利用 Taka-amylase A 基因之啟動子------------24
(二)利用 phosphoglycerate kinase 基因之啟動子---26
(三)利用glucoamylase 基因之啟動子-----------------26
(四)利用aspartic protease基因之啟動子-------------27
(五)轉形效率--------------------------------------28
(六)轉形株在有絲分裂時之穩定度--------------------28
三. 起動子對於 A. oryzae lap 基因在R. oryzae 中表現之影-29
(一)Taa 基因之啟動子-------------------------------29
(二)pgk基因之啟動子--------------------------------30
(三)Gla 基因之啟動子-------------------------------31
(四)aspartic protease基因之啟動子---------------------32
討論----------------------------------------------------33
一. R.oryzae轉形系統之建立-------------------------33
二. A. oryzae lap基因在R.oryzae 中之表現-----------36
三. pH 值對啟動子表現 LAP 的影響-------------------38
圖表----------------------------------------------------40
參考文獻------------------------------------------------72
1.Abe, A., T. Sone, I. N. Sujaya, K. Saito, Y. Oda, K. Asano, and F. Tomita. 2003. rDNA ITS sequence of Rhizopus oryzae: its application to classification and identification of lactic acid producers. Biosci Biotechnol Biochem 67:1725-31.
2.Aleksenko, A., and A. J. Clutterbuck. 1996. The plasmid replicator AMA1 in Aspergillus nidulans is an inverted duplication of a low-copy-number dispersed genomic repeat. Mol Microbiol 19:565-74.
3.Anke Burmester, A. W. a. J. W. 1990. Integrative transformation of azygomycete, Absidia glauce, with vectors containing repetitive DNA. current genetics 17:155-161.
4.Arnau, J., L. P. Jepsen, and P. Stroman. 1991. Integrative transformation by homologous recombination in the zygomycete Mucor circinelloides. Mol Gen Genet 225:193-8.
5.Ashikari, T., Nakamura, N., Tanaka, Y., Kiuchi, N., Shibano, Y., Tanaka, T., Amachi, and Y. T., H. 1986. Rhizopus Raw-Starch-Degrading Glucoamylase: Its Cloning and Exprssin in Yeast. Agric. Boil. Chem 50:957-964.
6.Beggs, J. D. 1978. Transformation of yeast by a replicating hybrud plasmid. Nature 275.
7.Benito, E. P., V. Campuzano, M. A. Lopez-Matas, J. I. De Vicente, and A. P. Eslava. 1995. Isolation, characterization and transformation, by autonomous replication, of Mucor circinelloides OMPdecase-deficient mutants. Mol Gen Genet 248:126-35.
8.Beri, R. K., and G. Turner. 1987. Transformation of Penicillium chrysogenum using the Aspergillus nidulans amdS gene as a dominant selective marker. Curr Genet 11:639-41.
9.Bundock, P., and P. J. Hooykaas. 1996. Integration of Agrobacterium tumefaciens T-DNA in the Saccharomyces cerevisiae genome by illegitimate recombination. Proc Natl Acad Sci U S A 93:15272-5.
10.Burmester, A., A. Wostemeyer, J. Arnau, and J. Wostemeyer. 1992. The SEG1 element: a new DNA region promoting stable mitotic segregation of plasmids in the zygomycete Absidia glauca. Mol Gen Genet 235:166-72.
11.Chambers, A., J. S. Tsang, C. Stanway, A. J. Kingsman, and S. M. Kingsman. 1989. Transcriptional control of the Saccharomyces cerevisiae PGK gene by RAP1. Mol Cell Biol 9:5516-24.
12.Chien, H. C., L. L. Lin, S. H. Chao, C. C. Chen, W. C. Wang, C. Y. Shaw, Y. C. Tsai, H. Y. Hu, and W. H. Hsu. 2002. Purification, characterization, and genetic analysis of a leucine aminopeptidase from Aspergillus sojae. Biochim Biophys Acta 1576:119-26.
13.Denison, S. H. 2000. pH regulation of gene expression in fungi. Fungal Genet Biol 29:61-71.
14.Denison, S. H., S. Negrete-Urtasun, J. M. Mingot, J. Tilburn, W. A. Mayer, A. Goel, E. A. Espeso, M. A. Penalva, and H. N. Arst, Jr. 1998. Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in Saccharomyces are homologous. Mol Microbiol 30:259-64.
15.Derynck, R., A. Singh, and D. V. Goeddel. 1983. Expression of the human interferon-gamma cDNA in yeast. Nucleic Acids Res 11:1819-37.
16.Edman, J. C. 1992. Isolation of telomerelike sequences from Cryptococcus neoformans and their use in high-efficiency transformation. Mol Cell Biol 12:2777-83.
17.Erlanger, B. F., N. Kokowsky, andw. Cohen. 1961. Arch. biochem. biophys 95:271-278.
18.Farley, P. C., and P. A. Sullivan. 1998. The Rhizopus oryzae secreted aspartic proteinase gene family: an analysis of gene expression. Microbiology 144 (Pt 8):2355-66.
19.Fotheringham, S., and W. K. Holloman. 1990. Pathways of transformation in Ustilago maydis determined by DNA conformation. Genetics 124:833-43.
20.Franke, A. E. K., F.S.; Eisenhard, M.E., et al. 1988. Expression and secretion of bovine prochymosin in Yarrowia lipolytica. Devel. Ind. Microbiol 29:43-57.
21.Friedberg, D., Y. Peleg, A. Monsonego, S. Maissi, E. Battat, J. S. Rokem, and I. Goldberg. 1995. The fumR gene encoding fumarase in the filamentous fungus Rhizopus oryzae: cloning, structure and expression. Gene 163:139-44.
22.Ge, S. J., and L. X. Zhang. 1996. The immobilized porcine pancreatic exopeptidases and its application in casein hydrolysates debittering. Appl Biochem Biotechnol 59:159-65.
23.Gomi, K., K. Kitamoto, and C. Kumagai. 1991. Cloning and molecular characterization of the acetamidase-encoding gene (amdS) from Aspergillus oryzae. Gene 108:91-8.
24.Gonzalez-Hernandez, G. A. 1997. Biolistic transformation of Mucor circinelloides. mycol. res. 101:953-956.
25.Harmsen, M. C., F. H. Schuren, S. M. Moukha, C. M. van Zuilen, P. J. Punt, and J. G. Wessels. 1992. Sequence analysis of the glyceraldehyde-3-phosphate dehydrogenase genes from the basidiomycetes Schizophyllum commune, Phanerochaete chrysosporium and Agaricus bisporus. Curr Genet 22:447-54.
26.Hirano, T., T. Sato, K. Okawa, K. Kanda, K. Yaegashi, and H. Enei. 1999. Isolation and characterization of the glyceraldehyde-3-phosphate dehydrogenase gene of Lentinus edodes. Biosci Biotechnol Biochem 63:1223-7.
27.Horiuchi, H., N. Takaya, K. Yanai, M. Nakamura, A. Ohta, and M. Takagi. 1995. Cloning of the Rhizopus niveus pyr4 gene and its use for the transformation of Rhizopus delemar. Curr Genet 27:472-8.
28.Houghton-Larsen, J., and P. A. Pedersen. 2003. Cloning and characterisation of a glucoamylase gene (GlaM) from the dimorphic zygomycete Mucor circinelloides. Appl Microbiol Biotechnol 62:210-7.
29.http://sciweb.scienceadelaide.edu.au/mycology/myco.nsfOpenDatabas.
30.Ishiguro, J., and M. Miyazaki. 1985. Characterization of blasticidin S-resistant mutants of Saccharomyces cerevisiae. Curr Genet 9:179-81.
31.Jessica Leigh., E. S., Naiara Rodriguez-Ezpeleta.,Yannick Jacob. 2004. Fungal Evolution Meets Fungal Genomics, vol. 12.
32.Kato, M. 2005. An overview of the CCAAT-box binding factor in filamentous fungi: assembly, nuclear translocation, and transcriptional enhancement. Biosci Biotechnol Biochem 69:663-72.
33.Kniskern, P. J., Hagopian, A., Motgemery, et al. 1986. Unusually high-level expression of a forgign gene (hepatiies B virus core antigen) in Saccharomyces cerevisiae. gene 46.
34.Koji, Y., Hiroyuki, H., Masamichi, T., Keiji, Y. 1991. Transformation of Rhizopus niveus using a bacterial blasticidin S resistance gene as a dominant selectable marker. Curr. Genet 19:221-226.
35.Kubodera, T., N. Yamashita, and A. Nishimura. 2000. Pyrithiamine resistance gene (ptrA) of Aspergillus oryzae: cloning, characterization and application as a dominant selectable marker for transformation. Biosci Biotechnol Biochem 64:1416-21.
36.Kuo, C. Y., S. Y. Chou, and C. T. Huang. 2004. Cloning of glyceraldehyde-3-phosphate dehydrogenase gene and use of the gpd promoter for transformation in Flammulina velutipes. Appl Microbiol Biotechnol 65:593-9.
37.Laemmli, U. K. 1970. Cleavage of structural protein during the assembly of the head of bacterophage T4. Nature 227:680-685.
38.Liou, C., Yanai, K., Horiuchi, H., Takagi, Y. 1992. Transformation of a Leu-Mutant of Rhizopus niveus with the leuA gene of Mucor circinelloides. Biosci.Biotec Biochem 56:1503-1504.
39.Lopes, T. S., J. Klootwijk, A. E. Veenstra, P. C. van der Aar, H. van Heerikhuizen, H. A. Raue, and R. J. Planta. 1989. High-copy-number integration into the ribosomal DNA of Saccharomyces cerevisiae: a new vector for high-level expression. Gene 79:199-206.
40.Mackenzie, D. A., P. Wongwathanarat, A. T. Carter, and D. B. Archer. 2000. Isolation and use of a homologous histone H4 promoter and a ribosomal DNA region in a transformation vector for the oil-producing fungus Mortierella alpina. Appl Environ Microbiol 66:4655-61.
41.Marek, E. T., C. L. Schardl, and D. A. Smith. 1989. Molecular transformation of Fusarium solani with an antibiotic resistance marker having no fungal DNA homology. Curr Genet 15:421-8.
42.Michielse, C. B., A. F. Ram, and C. A. van den Hondel. 2004. The Aspergillus nidulans amdS gene as a marker for the identification of multicopy T-DNA integration events in Agrobacterium-mediated transformation of Aspergillus awamori. Curr Genet 45:399-403.
43.Michielse, C. B., K. Salim, P. Ragas, A. F. Ram, B. Kudla, B. Jarry, P. J. Punt, and C. A. van den Hondel. 2004. Development of a system for integrative and stable transformation of the zygomycete Rhizopus oryzae by Agrobacterium-mediated DNA transfer. Mol Genet Genomics 271:499-510.
44.Monfort, A., L. Cordero, S. Maicas, and J. Polaina. 2003. Transformation of Mucor miehei results in plasmid deletion and phenotypic instability. FEMS Microbiol Lett 224:101-6.
45.Mooibroek, H., A. G. Kuipers, J. H. Sietsma, P. J. Punt, and J. G. Wessels. 1990. Introduction of hygromycin B resistance into Schizophyllum commune: preferential methylation of donor DNA. Mol Gen Genet 222:41-8.
46.Moriya, T., K. Murashima, A. Nakane, K. Yanai, N. Sumida, J. Koga, T. Murakami, and T. Kono. 2003. Molecular cloning of endo-beta-D-1,4-glucanase genes, rce1, rce2, and rce3, from Rhizopus oryzae. J Bacteriol 185:1749-56.
47.Nagamine, K., K. Murashima, T. Kato, H. Shimoi, and K. Ito. 2003. Mode of alpha-amylase production by the shochu koji mold Aspergillus kawachii. Biosci Biotechnol Biochem 67:2194-202.
48.Nara, F., I. Watanabe, and N. Serizawa. 1993. Development of a transformation system for the filamentous, ML-236B (compactin)--producing fungus Penicillium citrinum. Curr Genet 23:28-32.
49.Oda, Y., K. Saito, H. Yamauchi, and M. Mori. 2002. Lactic acid fermentation of potato pulp by the fungus Rhizopus oryzae. Curr Microbiol 45:1-4.
50.Old, R. W. P., S.B. 1994. Cloning in Saccahromyces cerevisias and other microbial eukaryotes in priciples of gene mainiplation chap. 13:237-267.
51.Park, S. H., S. S. Koh, J. H. Chun, H. J. Hwang, and H. S. Kang. 1999. Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19:2044-50.
52.Penttila, M., H. Nevalainen, M. Ratto, E. Salminen, and J. Knowles. 1987. A versatile transformation system for the cellulolytic filamentous fungus Trichoderma reesei. Gene 61:155-64.
53.Raeder, U., and p. Broda. 1985. Rapid preparation of DNA from filamentous fungi. Letters in Applied Microbiology 1:17-20.
54.Revuelta, J. L., and M. Jayaram. 1986. Transformation of Phycomyces blakesleeanus to G-418 resistance by an autonomously replicating plasmid. Proc Natl Acad Sci U S A 83:7344-7.
55.Romanos, M. A., Scorer C.A., Chare j.j. 1992. Foreign gene expression in yeast: a review. Yeast 8:423-288.
56.S.k. Misro, M. R. K., R. Banerjee, B.C. Bhattacharyya. 1997. Production of gallic acid by immobilization of Rhizopus oryzae. Bioprocess engineering 16:257-260.
57.Sakaguchi, J., and M. Yamamoto. 1982. Cloned ural locus of Schizosaccharomyces pombe propagates autonomously in this yeast assuming a polymeric form. Proc Natl Acad Sci U S A 79:7819-23.
58.Schweingruber, A. M., J. Dlugonski, E. Edenharter, and M. E. Schweingruber. 1991. Thiamine in Schizosaccharomyces pombe: dephosphorylation, intracellular pool, biosynthesis and transport. Curr Genet 19:249-54.
59.Skory, C. D. 2002. Homologous recombination and double-strand break repair in the transformation of Rhizopus oryzae. Mol Genet Genomics 268:397-406.
60.Skory, C. D. 2003. Induction of Rhizopus oryzae pyruvate decarboxylase genes. Curr Microbiol 47:59-64.
61.Skory, C. D. 2004. Repair of plasmid DNA used for transformation of Rhizopus oryzae by gene conversion. Curr Genet 45:302-10.
62.Takaya, N., K. Yanai, H. Horiuchi, A. Ohta, and M. Takagi. 1994. Cloning and characterization of two 3-phosphoglycerate kinase genes of Rhizopus niveus and heterologous gene expression using their promoters. Curr Genet 25:524-30.
63.Tan, P. S., T. A. van Kessel, F. L. van de Veerdonk, P. F. Zuurendonk, A. P. Bruins, and W. N. Konings. 1993. Degradation and debittering of a tryptic digest from beta-casein by aminopeptidase N from Lactococcus lactis subsp. cremoris Wg2. Appl Environ Microbiol 59:1430-6.
64.Tsuge, T., S. Nishimura, and H. Kobayashi. 1990. Efficient integrative transformation of the phytopathogenic fungus Alternaria alternata mediated by the repetitive rDNA sequences. Gene 90:207-14.
65.Tsujisaka, M. I. a. Y. 1974. The Purification and the Properties of Three Kinds of Lipases from Rhizopus delemer. Agr. Biol. Chem., 38:1241-1247.
66.Tsukagoshi, N., M. Furukawa, H. Nagaba, N. Kirita, A. Tsuboi, and S. Udaka. 1989. Isolation of a cDNA encoding Aspergillus oryzae Taka-amylase A: evidence for multiple related genes. Gene 84:319-27.
67.Tsukuda, T., S. Carleton, S. Fotheringham, and W. K. Holloman. 1988. Isolation and characterization of an autonomously replicating sequence from Ustilago maydis. Mol Cell Biol 8:3703-9.
68.Wada, M., T. Beppu, and S. Horinouchi. 1996. Integrative transformation of the zygomycete Rhizomucor pusillus by homologous recombination. Appl Microbiol Biotechnol 45:652-7.
69.Wallis, G. L., R. J. Swift, R. Atterbury, S. Trappe, U. Rinas, F. W. Hemming, M. G. Wiebe, A. P. Trinci, and J. F. Peberdy. 2001. The effect of pH on glucoamylase production, glycosylation and chemostat evolution of Aspergillus niger. Biochim Biophys Acta 1527:112-22.
70.Ward, M., L. J. Wilson, C. L. Carmona, and G. Turner. 1988. The oliC3 gene of Aspergillus niger: isolation, sequence and use as a selectable marker for transformation. Curr Genet 14:37-42.
71.Yanai, K., Horiuchi, H., Takagi, M., Yano, K. 1990. Preparation of protoplast of Rhizopus niveus and its transformation with plasmid DNA. Agric. Boil. Chem. 54:2689-2696.
72.Zhu, X., M. H. Wang, R. Qiu, L. Liu, Z. Dong, and G. Tang. 2004. The synergetic effects of two CCAAT boxes in Aspergillus niger glaA gene promoter on activation of PglaA transcription. Sci China C Life Sci 47:139-47.
73. 趙秀慧。2000。Aspergillus oryzae 與 Aspergillus sojae leucine aminopeptidase基因的選殖。碩士論文,分子生物研究所,中興大學,台中。
74. 管宜家。2003。Aspergillus oryzae leucine aminopeptidase基因的調控與表現。碩士論文,分子生物研究所,中興大學,台中。
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