王芷宜。2007。篩選劇抑制沙門氏菌之乳酸菌及其免疫效果評估。碩士論文。國立中興大學。廖啟成。2007。乳酸菌產業研發服務能量之建構。益生菌之益生機制與應用研討會。台灣乳酸菌協會。
Aarestrup, F.M., Scott, N.L. and Sordillo, L.M. (1994) Ability of Staphylococcus aureus coagulase genotypes to resist neutrophil bactericidal activity and phagocytosis. Infect. Immun. 62, 5679-5682.
Akineden, Ö., Annemüller, C., Hassan, A.A., Lämmler, C., Wolter, W. and Zschöck, M. (2001) Toxin genes and other characteristics of Staphylococcus aureus isolates from milk of cows with mastitis. Clin. Diagn. Lab. Immunol. 8, 959-964.
Akkermans, D.L. and de Vos, W.M. (2002) Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA. Appl. Environ. Microbiol. 68, 114-123.
Albuquerque, L., Rainey, F.A., Chung, A.P., Sunna, A., Nobre, M.F., Grote, R., Antranikian, G., and da Costa, M.S. (2000) Alicyclobacillus hesperidium sp. nov. and a related genomic species from solfataric soils of Sao Miguel in the Azores. Int. J. Syst Evol. Microbiol. 50, 451-457.
Allgaier, H., Poralla, K. and Jung, G. (1985) σ-Cycloheptyl-α- hydroxyundecanoic acid, a new fatty acid from a thermophilic acidophilic Bacillus species. Liebigs. Ann. Chem. 1985, 378-382.
Amor, K.B., Vaughan, E.E. and de Vos, W.M. (2007) Advanced molecular tools for the identification of lactic acid bacteria. J. Nutri. 137, 741S-747S.
Ayers, S.H. and Mudge, C.S., (1921) Two organisms of a commercial lactic starter. J. Dairy Sci. 4, 240-249.
Aquilanti, L., Santarelli, S., Silvestri, G., Osimani, A., Petruzzelli, A. and Clementi, F. (2007) The microbial ecology of a typical Italian salami during its natural fermentation. Int. J. Food Microbiol. 120, 136-145.
Baele, M., Vaneechoutte, M., Verhelst, R., Vancanneyt, M., Devriese, L.A. and Haesebrouck, F. (2002) Identification of Lactobacillus species using tDNA-PCR. J. Microbiol. Methods. 50, 263-271.
Baird, R.M. and Lee, W.H. (1995) Media used in the detection and enumeration of Staphylococcus aureus. Int. J. Food Microbiol. 26, 15-24.
Baird-Parker, A.A. (1962) An improved diagnositic and selective medium for isolating coagulase-positive staphylococci. J. Appl. Bacteriol. 25, 12-19.
Bakr, W.M., Fawzi, M. and Hashish, M.H. (2004) Detection of coagulase positive staphylococci in meat products sold in Alexandria using two different media. J. Egypt. Public Health Assoc. 79, 31-42.
Balaban, N. and Rasooly, A. (2000) Staphylococcal enterotoxins. Int. J. Food Microbiol. 61, 1-10.
Bano, N. and Hollibaugh, J.T. (2002) Phylogenetic composition of bacterioplankton assemblages from the Artic Ocean. Appl. Environ. Microbiol. 68, 505-518.
Batish, V.K., Chander, H., Ghodekar, D.R., Ranganathan, B. (1981) Production of thermonuclease deficient mutants from an enterotoxigenic thermonuclease producing strain of Staphylococcus aureus. J. Food Sci. 46, 1252-1254.
Bautista, L., Gaya, P., Medina, M. and Nunez, M. (1988) A quantitative study of enterotoxin production by sheep milk staphylococci. Appl. Environ. Microbiol. 54, 566-569.
Becker, K., Keller, B., Von Eiff, C., Bruck, M., Lubritz, G., Etitenne, J. and Peters, G. (2001) Enterotoxigenic potential of Staphylococcus intermedius. Appl. Environ. Microbiol. 67, 5551-5557.
Becker, K., von Eiff, C., Keller, B., Brück, M., Etienne, J. and Peters, G. (2005) Thermonuclease gene as a target for specific identification of Staphylococcus intermedius isolates: Use of a PCR-DNA enzyme immunoassay. Diagn. Microbiol. Infect. Dis. 51, 237-244.
Bengmark, S. (2002) Gut microbial ecology in critical illness: is there a role for prebiotics, probiotics, and synbiotics? Curr. Opin. Crit. Care. 8, 145-151.
Bergdoll, M.S. (1989) Staphylococcus aureus. In: Foodborne Bacterial Pathogens (Doyle, M.P., ed.). Marcel Dekker, Inc., New York, NY, USA, pp. 463-523.
Berke, A. and Tilton, R.C. (1986) Evaluation of rapid coagulase methods for the identification of Staphylococcus aureus. J. Clin. Microbiol. 23, 916-919.
Betzl, D., Ludwig, W. and Schleifer, K.H. (1990) Identification of lactococci and enterococci by colony hybridization with 23S rRNA-targeted oligonucleotide probes. Appl. Environ. Microbiol. 56, 2927-2929.
Bjorkroth, J., Ridell, J. and Korkeala, H. (1996) Characterization of Lactobacillus sakei strains associating with production of ropy slime by randomly amplified polymorphic DNA (RAPD) and pulsed-field gel electrophoresis (PFGE) patterns. Int. J. Food Microbiol. 31, 59-68.
Blaiotta, G., Pennacchia, C., Villani, F., Ricciardi, A., Tofalo, R. and Parente, E. (2004) Diversity and dynamics of communities of coagulase-negative staphylococci in traditional fermented sausages. J. Appl. Microbiol. 97, 271-284.
Blaiotta, G., Fusco, V., Ercolini, D., Aponte, M., Pepe, O. and Villani, F. (2008) Lactobacillus strain diversity based on partial hsp60 gene sequences and design of PCR-restriction fragment length polymorphism assays for species identification and differentiation. Appl. Environ. Microbiol. 74, 208-215.
Blaiotta, G., Pennacchia, C., Ercolini, D., Moschetti, G. and Villani, F. (2003) Combining denaturing gradient gel electrophoresis of 16S rDNA V3 Region and 16S-23S rDNA spacer region polymorphism analyses for the identification of staphylococci from Italian fermented sausages. Syst. Appl. Microbiol. 26, 423-433.
Boerlin P., Kuhnert, P., Hüssy, D. and Schaellibaum, M. (2003) Methods for identification of Staphylococcus aureus isolates in cases of bovine mastitis. J. Clin. Microbiol. 41, 767-771.
Boothby, J., Genigeorgis, C. and Fanelli, M.J. (1979) Tandem coagulase /thermonuclease agar method for the detection of Staphylococcus aureus. Appl. Environ. Microbiol. 37, 298-302.
Brock, T.D. and Darland, G. (1970) The limits of microbial existence: temperature and pH. Science. 169, 1316-1318.
Burriel, A.R. and Scott, M. (1997) Evaluation of the Staph-Zym system in the identification of staphylococci isolated from ovine milk and the ewe environment. J. Basic. Microbiol. 37, 245-250.
Buttery, J.P., Easton, M., Pearson, S.R. and Hogg, G.G. (1997) Pediatric bacteremia due to Staphylococcus warneri: microbiological, epidemiological, and clinical features. J. Clin. Microbiol. 35, 2174-2177.
Capurro, A., Concha, C., Nilsson, L. and Ostensson, K. (1999) Identification of coagulase-positive staphylococci isolated from bovine milk. Acta. Vet. Scand. 40, 315-321.
Carr, F.J., Chill, D. and Maida, N. (2002) The Lactic acid bacteria: A literature survey. Crit. Rev. Microbiol. 28, 281-370.
Cerny, G., Hennlich, W. and Poralla, K. (1984) Spoilage of fruit juice by bacilli: Isolation and characterization of the spoiling microorganism. Z. Lebensmitt. Unters. Forsch. 179, 224-227.
Chang, S. and Kang, D.H. (2005) Development of novel Alicyclobacillus spp. isolation medium. J. Appl. Microbiol. 99, 1051-1060.
Chang, S.S. and Kang, D.H. (2004) Alicyclobacillus spp. in the fruit juice industry: history, characteristics, and current isolation/detection procedures. Crit. Rev. Microbiol. 30, 55-74.
Chavagnat, F., Haueter, M., Jimeno, J. and Casey, M.G. (2002) Comparison of partial tuf gene sequences for the identification of lactobacilli. FEMS Microbiol. Lett. 217, 177-183.
Chesneau, O. and el Solh, N. (1994) Primary structure and biological features of a thermostable nuclease isolated from Staphylococcus hyicus, Gene. 145, 41-47.
Chesneau, O., Morvan, A., Aubert, S. and el Solh, N. (2000) The value of rRNA gene restriction site polymorphism analysis for delineating taxa in the genus Staphylococcus. Int. J. Syst. Evol. Microbiol. 50, 689-697.
Chesneau O. and el Solh, N. (1992) Nucleotide sequence of a nuc gene encoding the thermonuclease of Staphylococcus intermedius. Nucleic Acids Res. 20, 5232-5232.
Chiang, Y.C., Liao, W.W., Fan, C.M., Pai, W.Y., Chiou, C.S. and Tsen, H.Y. (2008) PCR detection of Staphylococcal enterotoxins (SEs) N, O, P, Q, R, U, and survey of SE types in Staphylococcus aureus isolates from food poisoning cases in Taiwan. Int. J. Food Microbiol. 121, 66-73.
Choi, Y., Lafferty, J., Cleents, J., Todd, J., Gelfand, E., Kappler, J., Marrack, P. and Kotzin, B. (1990) Selective expansion of T cells expressing Vb2 in toxic shock syndrome. J. Exp. Med. 172, 981-984.
Chomczynski, P. and Sacchi, N. (1987) Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162, 156-159
Chou, C.C. and Chen, L.F. (1997) Enterotoxin production by Staphylococcus warneri CCRC 12929, a coagulase-negative strain. J. Food Prot. 60, 923-927.
Cocconcelli, P.S., Parisi, M.G., Senini, L. and Bottazzi, V. (1997) Use of RAPD and 16S rDNA sequencing for the study of Lactobacillus population dynamics in natural whey culture. Lett. Appl. Microbiol. 25, 8-12.
Cocolin, L., Bisson, L.F. and Mills, D.A. (2000) Direct profiling of the yeast dynamics in wine fermentations. FEMS Microbiol. Lett. 189, 81-87.
Coeuret, V., Dubernet, S., Bernadeau, M., Gueguen, M. and Vernoux, J.P. (2003) Isolation, characterization and identification of lactobacilli focusing mainly on cheeses and other dairy products. Lait. 83, 269-306
Collins, M.D., Ash, C., Farrow, J.A.E., Wallbanks, S. and William, A.M. (1989) 16S ribosomal ribonucleic acid sequence analysis of lactobacilli and related taxa. Description of Vagococcus fluvialis gen. nov.. sp. Nov. J. Appl. Bacteriol. 67, 453-460.
Collins, M.D., Farrow, J.A.E., Phillips, B.A., Farrow, S. and Jones, D. (1987) Classification of Lactobacillus divergens, Lactobacillus piscicola, and some catalase-negative, asporogenous, rod-shaped bacteria from poultry in a new genus, Carnobacterium. Int. J. Syst. Bacteriol. 34, 220-223.
Collins, M.D., Samelis, J., Metaxopoulos, J. and Wallbanks, S. (1993) Taxonomic studies on some Leuconostoc-like organisms from fermented sausages: description of a new genus Weissella for the Leuconostoc paramesenteroides group of species. J. Appl. Bacteriol. 75, 595-603.
Collins, M.D., Rodrigues, U., Ash, C., Aguirre, M., Farrow, J.A.E., Martinez-Murcia, A., Phillips, B.A., Williams, A.M. and Wallbanks, S. (1991) Phylogenetic analysis of the genus Lactobacillus and related lactic acid bacteria as determined by reverse transcriptase sequencing of 16S rRNA FEMS Microbiol. Lett. 77, 5-12.
Collins, M.D. Williams, A.M. and Wallbanks, S. (1990) The phylogeny of Aerococcus and Pediococcus as determined by 16S rRNA sequence analysis: description of Tetragenococcus gen. nov. FEMS Microbiol. Lett. 70, 255-262.
Connor, C. J., Luo, H.B.B., Gardener, M. and Wang, H.H. (2005) Development of a real-time PCR-based system targeting the 16S rRNA gene sequence for rapid detection of Alicyclobacillus spp. in juice products. Int. J. Food Microbiol. 99, 229-235.
Couto, I., Pereira, S., Miragaia, M., Sanches, I.S. and de Lencastre, H. (2001) Identification of clinical staphylococcal isolates from humans by internal transcribed spacer PCR. J. Clin. Microbiol. 39, 3099-3103.
Craft, A. and Finer, N. (2001) Nosocomial coagulase negative staphylococcal (CoNS) catheter-related sepsis in preterm infants: definition, diagnosis, prophylaxis, and prevention. J. Perinatol. 21, 186-192.
Crump, B.C., Kling, G.W., Bahar, M. and Hobbie, J.E. (2003) Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Appl. Environ. Microbiol. 69, 2253-2268.
da Cunha, M.D.L.R.S., Sinzato Y.K. and Silveira, L.V. (2004) Comparison of methods for the identification of coagulase-negative staphylococci. Mem. Inst. Oswaldo. Cruz. 99, 855-860.
da Cunha, M.D.L.R.S, Calsolari, R.A.O. and Araújo Júnior J.P. (2007) Detection of enterotoxin and toxic shock syndrome toxin 1 genes in Staphylococcus, with emphasis on coagulase-negative staphylococci. Microbiol. Immunol. 51, 381-390.
Dakic, I., Vukovic, D., Stepanovic, S., Hauschild, T., Jezek, P., Petrás, P. and Morrison, D. (2005) Survey of genes encoding staphylococcal enterotoxins, toxic shock syndrome toxin 1, and exfoliative toxins in members of the Staphylococcus sciuri group. J. Clin. Microbiol. 43, 4875-4876.
Darland, G. and Brock, T.D. (1971) Bacillus acidocaldarius sp. nov., an acidophilic thermophilic sporeforming bacterium. J. Gen. Microbiol. 67, 9-15.
Daud Khaled, A.K., Neilan, B.A., Henriksson, A. and Conway, P.L. (1997) Identification and phylogenetic analysis of Lactobacillus using multiplex RAPD-PCR. FEMS Microbiol. Lett. 153, 191-197.
de Buyser, M.L., Dufour, B., Maire, M. and Lafarge, V. (2001) Implication of milk and milk products in food-borne diseases in France and in different industrialised countries. Int. J. Food Microbiol. 67, 1-17.
de Buyser, M.L., Morvan, A., Aubert, S., Dilasser, F. and el Sohl, N. (1992) Evaluation of ribosomal RNA gene probe for the identification of species and subspecies within the genus Staphylococcus. J. Gen. Microbiol. 138, 889-899.
de Moreno de Leblanc, A. and Perdigon, G. (2005) Reduction of β-Glucuronidase and nitroreductase activity by yoghurt in a murine colon cancer model. Biocell. 29, 15-24.
Deinhard, G., Blanz, P., Poralla, K. and Altan, E. (1987a) Bacillus acidoterrestris sp. nov., a new thermotolerant acidophile isolated from different soils. Syst. Appl. Microbiol. 10, 47-53.
Deinhard, G., Saar, J., Krischke, W., and Poralla, K. (1987b) Bacillus cycloheptanicus sp. nov., a new thermoacidophile containing ω-cycloheptane fatty acids. Syst. Appl. Microbiol. 10, 68-73.
Delgado, S., Arroyo, R., Martín, R. and Rodríguez, J.M. (2007) PCR-DGGE assessment of the bacterial diversity of breast milk in women with lactational infectious mastitis. BMC Infect. Dis. 8, 51.
Dellaglio F. and Felis G.E. (2005) Taxonomy of lactobacilli and bifidobacteria. In: Probiotics and Prebiotics: Scientific Aspects, pp. 25-50. Edited by G.W. Tannock, Caister Academic Press, Norfolk, UK.
Denter, J. and Bisping, B. (1994) Formation of B-vitamins by bacteria during the soaking process of soybeans for tempe fermentation. Int. J. Food. Microbiol. 22, 23-31.
Dicks, L.M.T., Dellaglio, F. and Collins, M.D. (1995) Proposal to reclassify Leuconostoc oenos as Oenococcus oeni [corrig.] gen. nov., comb. nov. Int. J. Syst. Bacteriol. 45, 395-397.
do Carmo, L.S., Dias, R.S., Linardi, V.R., de Sena, M.J., dos Santos, D.A., de Faria, M.E., Pena, E.C., Jett, M. and Heneine, L.G. (2002) Food poisoning due to enterotoxigenic strains of Staphylococcus present in Minas cheese and rawmilk in Brazil. Food Microbiol. 19, 9-14.
Doores, S. (1983) The microbiology of apples and apple products. Crit. Rev. Food Sci. 19, 133-149.
Dowd, S.E., Sun, Y., Secor, P.R., Rhoads, D.D., Wolcott, B.M., James, G.A. and Wolcott, R.D. (2007) Survey of bacterial diversity in chronic wounds using Pyrosequencing, DGGE, and full ribosome shotgun sequencing. BMC Microbiol. 8, 43.
Drancourt, M. and Raoult, D. (2002) rpoB gene sequence-based identification of Staphylococcus species. J. Clin. Microbiol. 40, 1333-1338.
Dziarski, R. (1991) Demonstration of peptidoglycan-binding sites on lymphocytes and macrophages by photoaffinity cross-linking. J. Biol. Chem. 266, 4713-4718.
Ercolini, D., Hill, P.J., Dodd, C.E.R. (2003) Bacterial community structure and location in Stilton cheese. Appl. Environ. Microbiol. 69, 3540-3548.
Ercolini, D. (2004) PCR-DGGE fingerprinting: novel strategies for detection of microbes in food. J. Microbiol. Methods 56, 297-314.
Evenson, M.L., Hinds, M.W., Bernstein, R.S. and Bergdoll, M.S. (1988) Estimation of human dose of staphylococcal enterotoxin A from a large outbreak of staphylococcal food poisoning involving chocolate milk. Int. J. Food Microbiol. 7, 311-316.
Farrand, S.G., Linton, J.D., Stephenson, R.J. and MacCarthy, W.V. (1983) The use of response surface analysis to study growth of Bacillus acidocaldarius throughout the growth range of temperature and pH. Arch. Microbiol. 135, 272-275.
Fasoli, S., Marzotto, M., Rizzotti, L., Rossi, F., Dellaglio, F. and Torriani, S. (2003) Bacterial composition of commercial probiotic products as evaluated by PCR-DGGE analysis. Int. J. Food Microbiol. 82, 59-70.
Felis, G.E. and Dellaglio, F. (2007) Taxonomy of lactobacilli and bifidobacteria. Curr. Issues Intest. Microbiol. 8, 44-61.
Felis, G.E., Dellaglio, F., Mizzi, L. and Torriani, S. (2001) Comparative sequence analysis of a recA gene fragment brings new evidence for a change in the taxonomy of the Lactobacillus casei group. Int. J. Syst. Evol. Microbiol. 51, 2113-2117.
Ferris, M.J., Muyzer, G. and Ward, D.M. (1996) Denaturing gradient gel electrophoresis profiles of 16S rRNA-defined populations inhabiting a hot spring microbial mat community. Appl. Environ. Microbiol. 62, 340-346.
Fisher, S.G. and Lerman, L.S. (1983) DNA fragments differing by single base pair substitutions are separated in denaturing gradient gels: correspondence with melting theory. Proc. Natl. Acad. Sci. U. S. A. 80, 1579-1583.
Fontana, C., Vignolo, G. and Cocconcelli, P.S. (2005) PCR–DGGE analysis for the identification of microbial populations from Argentinean dry fermented sausages. J. Microbiol. Methods. 63, 254-263.
Forsman, P., Tilsala-Timisjarvi, A. and Alatossava, T. (1997) Identification of staphylococcal and streptococcal causes of bovine mastitis using 16S-23S rRNA spacer regions. Microbiology 143, 3491-3500.
Fueyo, J.M., Martin, M.C., Gonzalez-Hevia, M.A. and Mendoza, M.C. (2001) Enterotoxin production and DNA fingerprinting in Staphylococcus aureus isolated from human and food samples. Relations between genetic types and enterotoxins. Int. J. Food Microbiol. 67, 139-145.
Funes-Huacca, M., de Almeida Regitano,L.C., Mueller, O. and Carrilho, E. (2004) Semi-quantitative determination of Alicyclobacillus acidoterrestris in orange juice by reverse transcriptase polymerase chain reaction and capillary electrophoresis-laser induced fluorescence using microchip technology. Electrophoresis 25, 3860-3864.
Futagawa-Saito, K., Suzuki, M., Ohsawa, M., Ohshima, S., Sakurai, N., Ba-Thein, W. and Fukuyasu, T. (2004) Identification and prevalence of an enterotoxin-related gene, se-int, in Staphylococcus intermedius isolates from dogs and pigeons. J. Appl. Microbiol. 96, 1361-1366.
Gancheva, A., Pot, B., Vanhonacker, K., Hoste, B. and Kersters, K. (1999) A polyphasic approach towards the identification of strains belonging to Lactobacillus acidophilus and related species. Syst. Appl. Microbiol. 22, 573-585.
Gandra, E.A., Silva, J. A., Macedo, M.R.P., Araújo, M.R., Mata, M. M. and Silva, W.P. (2005) Biochemical differentiation among S. aureus, S. intermedius and S. hyicus isolated from bovines with subclinical mastitis. Arch. Vet. Sci. 10, 75-81.
Gevers, D., Huys, G. and Swings, J. (2001) Applicability of rep-PCR fingerprinting for identification of Lactobacillus species. FEMS Microbiol. 205, 31-36.
Giammarinaro, P., Leroy, S., Chacornac, J.P., Delmas, J. and Talon, R. (2005) Development of a new oligonucletide array to identify staphylococcal strains at species level. J. Clin. Microbiol. 43, 3673-3680.
Gilliland, S.E. (1989) Acidophilus milk products: a review of potential benefits to consumers. J. Dairy Sci. 72, 2483-2494.
Goh, S., Santucci, Z., Kloos, W.E., Faltyn, M., George, C.G., Driedger, D. and Hemmingsen, S.M. (1997) Identification of Staphylococcus species and subspecies by the chaperonin 60 gene identification method and reverse checkerboard hybridization. J. Clin. Microbiol. 35, 3116-3121.
Gómez-Lucía, E., Goyache, J., Orden, J.A., Domenech, A., Hernandez, F.J., Quiteria, J.A.R.S., Lopez, B., Blanco, J.L. and Suárez, G. (1992) Growth of Staphylococcus aureus and synthesis of enterotoxin during ripening of experimental Manchego-type cheese. J. Dairy Sci. 75, 19-26.
Goto, K., Mochida, K., Kato, Y., Asahara, M., Fujita, R., An, S.Y., Kasai, H. and Yokota, A. (2007) Proposal of six species of moderately thermophilic, acidophilic, endospore-forming bacteria: Alicyclobacillus contaminans sp. nov., Alicyclobacillus fastidiosus sp. nov., Alicyclobacillus kakegawensis sp. nov., Alicyclobacillus macrosporangiidus sp. nov., Alicyclobacillus sacchari sp. nov. and Alicyclobacillus shizuokensis sp. nov. Int. J. Syst. Evol. Microbiol. 57, 1276-1285.
Goto, K., Tanimoto, Y., Tamura, T., Mochida, K., Arai, D., Asahara, M., Suzuki, M., Tanaka, H. and Inagaki, K. (2002a) Identification of thermoacidophilic bacteria and a new Alicyclobacillus genomic species isolated from acidic environments in Japan. Extremophlies. 6, 333-340.
Goto, K., Matsubara, H., Mochida, K., Matsumura, T., Hara, Y., Niwa, M., and Yamasato, K. (2002b) Alicyclobacillus herbarius sp. nov., a novel bacterium containing ω-cycloheptane fatty acids, isolated from herbal tea. Int. J. Syst. Evol. Microbiol. 52, 109-113.
Goto, K., Mochida, K., Asahara, M., Suzuki, M., Kasai, H. and Yokota, A. (2003) Alicyclobacillus pomorum sp. nov., a novel thermo-acidophilic, endospore-forming bacterium that does not possess omega-alicyclic fatty acids, and emended description of the genus Alicyclobacillus. Int. J. Syst. Evol. Microbiol. 53, 1037-1044.
Gouws, P.A, Gie, L., Pretorius, A. and Dhansay, N. (2005) Isolation and identification of Alicyclobacillus acidocaldarius by 16S rDNA from mango juice and concentrate. Int. J. Food Sci. Tech 40, 789-792.
Gray, N.D., Miskin, I.P., Kornilova, O., Curtis, T.P. and Head, I.M. (2002) Occurrence and activity of Archea in areated activated sludge wastewater treatment plants. Environ. Microbiol. 4, 158-168.
Griethuysen, A., Bes, M., Etienne, J., Zbinden, R. and Kluytmans, J. (2001) International multicenter evaluation of latex agglutination tests for identification of Staphylococcus aureus. J. Clin. Microbiol. 39, 86-89.
Grill, J.P., Cayuela, C., Antoine, J.M. and Schneider, F. (2000) Effects of Lactobacillus amylovorus and Bifidobacterium breve on cholesterol. Lett Appl. Microbiol. 31, 154-156.
Groisillier, A. and Lonvaud-Funel, A. (1999) Comparison of partial malolactic enzyme gene sequences for phylogenetic analysis of some lactic acid bacteria species and relationships with the malic enzyme. Int. J. Syst. Bacteriol. 49, 1417-1428.
Guardabassi, L., Loeber, M.E. and Jacobson, A. (2004) Transmission of multiple antimicrobial-resistant Staphylococcus intermedius between dogs affected by deep pyoderma and their owners. Vet. Microbiol. 98, 23-27.
Guarner, F. and Schaafsma, G.J. (1998) Probiotics. Int. J. Food Microbiol. 39, 237-238.
Hamilton-Miller, J.M.T., Shah, S. and Winkler, J.T. (1999) Public health issues arising from microbiological and labelling quality of foods and supplements containing probiotic microorganims, Public Health Nutr. 2, 223-229.
Hammes, W.P. and Hertel, C. (2003). The Genera Lactobacillus and Carnobacterium. In: The Prokaryotes Release 3.15, Editor Martin Dworkin.
Hammes, W.P. and Vogel, R.F. (1995) The genus Lactobacillus. In: The Genera of Lactic Acid Bacteria, vol. 2, pp. 19-4. Edited by Wood, B.J.B. and Holzapfel, W. H. Blackie Academic and Professional (UK).
Hans G.H., Heilig, J., Zoetendal, E.G., Vaughan, E.E., Marteau, P., Akkermans, A.D.L. and de Vos. W.M. (2002) Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA. Appl. Environ. Microbiol. 68, 114-123.
Harmon, R.J., Langlois, B.E. and Akers, K. (1991) A simple medium for the verification of identity of Staphylococcus aureus of bovine origin. J. Dairy Sci. 74 (Suppl4), 202-203.
Harrichandparsad, Z. (2007) Evaluation of bacteriological technique,sensory evaluation, gas chromatography and electronic nose technology for the detection of Alicyclobacillus acidoterrestris in fruit juices. Master thesis. Durban University of Technology, Durban, South Africa.
Hatakka, K., Savilahti, E., Ponka, A., Meurman, J.H., Poussa, T., Nase, L., Saxelin, M. and Korpela, R. (2001) Effect of long term consumption of probiotic milk on infections in children attending day care centres: double blind, randomised trial. BMJ 322, 1327.
Haza, A. I., Zabala, A. and Morales, P. (2003) Protective effect and cytokine production of a Lactobacillus plantarum strain isolated from ewes’ milk cheese. Int. Dairy J. 14, 29-38.
Heilig, H.G.H.J., Zoetendal, E.G., Vaughan, E.E., Marteau, P., Akkermans, A.D.L. and de Vos W.M. (2002) Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA. Appl Environ Microbiol. 68, 114-123.
Heller, K. J. (2001) Probiotic bacteria in fermented foods: product characteristics and starter organisms. Am. J. Clin. Nutr. 73, 374S-379S.
Heumann, D., Barras C., Severin A., Glauser M.P. and Tomasz A. (1994) Gram-positive cell walls stimulate synthesis of tumor necrosis factor alpha and interleukin-6 by human monocytes. Infect. Immun. 62, 2715-2721.
Hickson, M., D''Souza, A.L., Muthu, N., Rogers, T.R., Want, S., Rajkumar, C. and Bulpitt, C.J. (2007) Use of probiotic Lactobacillus preparation to prevent diarrhoea associated with antibiotics: randomised double blind placebo controlled trial. BMJ 335, 80-83.
Hippchen, B., Rll, A., and Poralla, K. (1981) Occurrence in soil of thermoacidophilic bacilli possessing ω-cyclohexane fatty acids and hopanoids. Arch. Microbiol. 129, 53-55.
Hiraishi, A., Inagaki, K., Tanimoto, Y., Iwasaki, M., Kishimoto, N., and Tanaka, H. (1997) Phylogenetic characterization of a new thermoacidophilic bacterium isolated from hot springs in Japan. J. Gen. Appl. Microbiol. 43, 295-304.
Hirayama, K. and Rafter, J. (2000) The role of probiotic bacteria in cancer prevention. Microbes Infect. 2, 681-686.
Ho, P.L. (2007) Community-associated Methicillin-resistant Staphylococcus aureus (CA-MRSA) is emerging or just Re-emerging? Hong Kong Med. Dairy. 12, 2-3.
Hu, C.C., Hsiao, C.H., Huang, S.Y., Fu, S.H., Lai, C.C., Hong, T.M., Chen, H.H. and Lu, F.J. (2004) Antioxidant activity of fermented soybean extract. J. Agric. Food Chem. 52, 5735-5739.
Huys, G., Vancanneyt, M., D''Haene, K., Vankerckhoven, V., Goossens, H. and Swings, J. (2006) Accuracy of species identity of commercial bacterial cultures intended for probiotic or nutritional use. Res. Microbiol. 157, 803-810.
Ieven, M., Verhoeven, J., Pattyn, S.R. and Goossens, H. (1995) Rapid and economical method for species identification of clinically significant coagulase-negative staphylococci. J. Clin. Microbiol. 33, 1060-1063.
Imperio, I., Viti, C. and Marri, L. (2008) Alicyclobacillus pohliae sp. Nov., a thermophilic, endospore-forming bacterium isolated from geothermal soil of north-west slope of Mount Melbourne (Antarctica). Int. J. Syst. Evol. Microbiol. 58, 221-225.
Irlinger, F. (2007) Coagulase-negative staphylococci. Int. J. Food Mocrobiol. doi:10.1016/j.ijfoodmicro.2007.08.016
Jensen, N. and Whitfield, F.B. (2003) Role of Alicyclobacillus acidoterrestris in the development of a disinfectant taint in shelf-stable fruit juice. Lett. Appl. Microbiol. 36, 9-14.
Jones, D.J. and Munro, C.L. (2008) Oral care and the risk of bloodstream infections in mechanically ventilated adults: A review. Intensive Crit. Care Nurs. 24, 152-161.
Jonsson, P., Lindberg, M., Haraldsson, I. and Wadstrom, T. (1985) Virulence of Staphylococcus aureus in a mouse mastitis model: studies of alpha hemolysin, coagulase, and protein A as possible virulence determinants with protoplast fusion and gene cloning. Infect. Immun. 49, 765-769.
Kamath, U., Singer, C. and Isenberg, H.D. (1992) Clinical significance of Staphylococcus warneri bacteremia. J. Clin. Microbiol. 30, 261-264.
Kannenberg, E., Blume, A., and Poralla, K. (1984) Properties of ω-cyclohexane fatty acids in membranes. FEBS Lett. 172, 331-334.
Karavaiko, G.I., Bogdanova, T.I., Tourova, T.P., Kondrat''eva ,T.F., Tsaplina, I.A., Egorova, M.A., Krasil''nikova, E.N. and Zakharchuk, L.M. (2005) Reclassification of ''Sulfobacillus thermosulfidooxidans subsp. thermotolerans'' strain K1 as Alicyclobacillus tolerans sp. nov. and Sulfobacillus disulfidooxidans dufresne et al. 1996 as Alicyclobacillus disulfidooxidans comb. nov., and emended description of the genus Alicyclobacillus. Int. J. Syst. Evol. Microbiol. 55, 941-947.
Kawabata, S.I., Morita, T., Iwanaga, S. and Igarashi. H. (1985) Enzymatic properties of staphylothrombin, an active molecular complex formed between staphylocoagulase and human prothrombin. J. Biochem. 98, 1603-1614.
Ke, D., Boissinot, M., Huletsky, A., Picard, F.J., Frenette, J., Ouellette, M., Roy, P.H. and Bergeron, M.G.. (2000) Evidence for horizontal gene transfer in evolution of elongation factor Tu in enterococci. J. Bacteriol. 182, 6913-6920.
Kim, H.S. and Gilliland, S.E. (1983) Lactobacillus acidophilus as a dietary adjunct for milk to aid lactose digestion in humans. J. Dairy Sci. 66, 959-966.
Klapes, N.A. (1983) Comparison of Vogel-Johnson and Baird-Parker media for membrane filtration recovery of staphylococci in swimming pool water. Appl. Environ. Microbiol. 46, 1318-1322.
Klaver, F.A., and van der Meer, R. (1993) The assumed asimilation of cholsterol by lactobacilli and Bifidobacterium bifidum is due to their bile salt-deconjugating activity. Appl. Environ. Microbiol. 59, 1120-1124.
Kloos, W.E. and Schleifer, K.H. (1975) Simplified scheme for routine identification of human Staphylococcus species. J. Clin. Microbiol. 1, 82-88.
Komitopoulou, E., Boziaris, I.S., Davies, E.A., Delves-Broughton, J. and Adams, M.R. (1999) Alicyclobacillus acidoterrestris in fruit juices and its control by nisin. Int. J. Food Sci. Technol. 34, 81-85.
Krakauer, T. (1999) Immune response to staphylococcal superantigens. Immunol. Res. 20, 163-173.
Kwok, A.Y. and Chow, A.W. (2003) Phylogenetic study of Staphylococcus and Macrococcus species based on partial hsp60 gene sequences. Int. J. Syst. Evol. Microbiol. 53, 87-92.
Lancefield, R.C. (1933) A serological differentiation of human and other groups of hemolytic streptococci. J. Exp. Med. 57, 571-595.
Ladhani, S., Joannou, C.L., Lochrie, D.P., Evans, R.W. and Poston, S.M. (1999) Clinical, microbial, and biochemical aspects of the xxfoliative toxins causing staphylococcal scalded-skin syndrome. Clin. Microbiol. Rev. 12, 224-242.
Lane, D.J. (1991) 16S/23S rRNA sequencing. In: Nucleic Acid Techniques in Bacterial Systematics (Stackebrandt, E. and Goodfellow, M., Eds.), pp. 115-148. John Wiley and Sons, New York.
Lawrynowicz-Paciorek, M., Kochman, M., Piekarska, K., Grochowska, A. and Windyga, B. (2007) The distribution of enterotoxin and enterotoxin-like genes in Staphylococcus aureus strains isolated from nasal carriers and food samples. Int. J. Food Microbiol.117, 319-323.
Le Loir, Y., Baron, F. and Gautier, M. (2003) Staphylococcus aureus and food poisoning. Genet. Mol. Res. 2, 63-76.
Lee, J.S., Heo, G.Y., Lee, J.W., Oha, Y.J., Park, J.A., Park, Y.H., Pyun, Y.R. and Ahn, J.S. (2005) Analysis of kimchi microflora using denaturing gradient gel electrophoresis. Int. J. Food Microbiol. 102, 143-150.
Lee, S.Y., Dougherty, R. H. and Kang, D.H. (2002) Inhibitory effects of high pressure and heat on Alicyclobacillus acidoterrestris spores in apple juice. Appl. Environ. Microbiol. 68, 4158-4161.
Leena, S., Tiina, J., Tuija, P. and Riitta, K. (2003) A fermented milk high in bioactive peptides has a blood pressure-lowering effect in hypertensive subjects. Am. J. Clin. Nutr. 77, 326-330.
Li, M.Y., Zhou, G.H., Xu, X.L., Li, C.B., and Zhu, W.Y. (2006) Changes of bacterial diversity and main flora in chilled pork during storage using PCR-DGGE. Food Microbiol. 23, 607-611.
Li, Y., Ku, C.Y.S., Xu, J., Saxena, D. and Caufield, P.W. (2005) Survey of oral microbial diversity using PCR-based denaturing gradient gel electrophoresis. J. Dent. Res. 84, 559-564.
Lin M. Y. and Yen C. L. (1999) Inhibition of lipid peroxidation by Lactobacillus acidophilus and Bifidobacterium longum. J. Agric. Food Chem. 47, 3661-3664.
Lina, G., Bohach, G.A., Nair, S.P., Hiramatsu, K., Jouvin-Marche, E. and Mariuzza, R. (2004) Standard nomenclature for the superantigens expressed by Staphylococcus. J. Infect. Dis. 189, 2334-2336.
Luo, H., Yousef, A.E. and Wang, H.H. (2004) A real-time polymerase chain reaction-based method for rapid and specific detection of spoilage Alicyclobacillus spp. in apple juice. Lett. Appl. Microbiol. 39, 376-382.
Macnaughton, S.J., Stephen, J.R., Venosa, A.D., Davis, G.A., Chang, Y.J. and White, D.C. (1999) Microbial population changes during bioremediation of an experimental oil spill. Appl. Environ. Microbiol. 65, 3566-3574.
Maes, N., De Gheldre, Y., De Ryck, R., Vaneechoutte, M., Meugnier, H., Etifnne, J. and Struelens. M.J. (1997) Rapid and accurate identification of Staphylococcus species by tRNA intergenic spacer length polymorphism analysis. J. Clin. Microbiol. 35, 2477-2481.
Manninen, T.J.K., Rinkinen, M.L., Beasley, S.S. and Saris, P.E.J. (2006) Alteration of the canine small-intestinal lactic acid bacterium microbiota by feeding of potential probiotics. Appl. Envir. Microbiol. 72, 6539-6543.
Margus, T., Remm, M. and Tenson, T. (2007) Phylogenetic distribution of translational GTPases in bacteria. BMC Genomics. 8, 15.
Martineau, F., Picard, F.J., Roy, P.H., Ouellette, M. and Bergeron, M.G. (1996) Species-specific and ubiquitous DNA-based assays for rapid identification of Staphylococcus epidermidis. J. Clin. Microbiol. 34, 2888-2893.
Martineau, F., Picard, F.J., Ke, D., Paradis, S., Roy, P., Ouellette, M. and Bergeron, M.G. (2001) Development of a PCR assay for identification of staphylococci at genus and species levels. J. Clin. Microbiol. 39, 2541-2547.
Masco, L., Huys, G., de Brandt, E., Temmerman, R. and Swings, J. (2005) Culture-dependent and culture-independent qualitative analysis of probiotic products claimed to contain bifidobacteria. Int. J. Food Microbiol. 102, 221-230.
Mason, W.J., Blevins, J.S., Beenken, K., Wibowo, N., Ojha, N. and Smeltzer, M.S. (2001) Multiplex PCR protocol for the diagnosis of staphylococcal infection. J. Clin. Microbiol. 39, 3328-3332.
Matsubara, H., Goto, K., Matsumura, T., Mochida, K., Iwaki, M., Niwa, M., and Yamasato, K. (2002) Alicyclobacillus acidiphilus sp. nov., a novel thermo-acidophilic, ω-alicyclic fatty acid-containing bacterium isolated from acidic beverages. Int. J. Sys. Evo. Microbiol. 52, 1681-1685.
Mccaig, A.E., Glover, L.A. and Prosser, J.I. (2001) Numerical analysis of grassland bacterial community structure under different land management regimens by using 16S ribosomal DNA sequence data and denaturing gradient gel electrophoresis banding patterns. Appl. Environ. Microbiol. 67, 4554-4559.
McDevitt, D., Vaudaux, P. and Foster, T.J. (1992) Genetic evidence that bound coagulase of Staphylococcus aureus is not clumping factor. Infect. Immun. 60, 1514-1523.
McDougal, L.K., Steward, C.D. and Killgore, G.E. (2003) Pulsed-Field Gel Electrophoresis Typing of oxacillin-resistant Staphylococcus aureus isolates from the United States: Establishing a national database. J. Clin. Microbiol. 41, 5113-5120.
Megson, G.M., Law, D. and Ganguli, L.A. (1991) Problems of thermonuclease detection for identifying Staphylococcus aureus in blood culture broths. J. Clin. Pathol. 44, 772-774.
Menzies R.E. (1977) Comparison of coagulase, deoxyribonuclease (DNase), and heat-stable nuclease tests for identification of Staphylococcus aureus. J. Clin. Pathol. 30, 606-608.
Meroth, C.B., Walter, J., Hertel, C., Brandt, M.J. and Hammes, W.P. (2003) Monitoring the bacterial population dynamics in sourdough fermentation processes by using PCR-denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 69, 475-482.
Meurman, J.H. and Stamatova, I. (2007) Probiotics: contributions to oral health. Oral Dis. 13, 443-451.
Meyrand, A., Boutrand-Loei, S., Ray-Gueniot, S., Mazuy, C.C., Gaspard, E., Jaubert, G., Perrin, G., Lapeyre, C. and Vernozy-Rozand, C. (1998) Growth and enterotoxin production of Staphylococcus aureus during the manufacture and ripening of Camembert-type cheeses from raw goats'' milk. J. Appl. Microbiol. 85, 537-544.
Morot-Bizot, S.C., Talon, R. and Leroy, S. (2004) Development of a multiplex PCR for the identification of Staphylococcus genus and four staphylococcal species isolated from food. J. Appl. Microbiol. 97, 1087-1094.
Murakami, M., Tedzuka, H., and Yamazaki, K. (1998) Thermal resistance of Alicyclobacillus acidoterrestris spores in different buffers and pH. Food Microbiol. 15, 577-582.
Murray, P.R., Rosenthal, K.S., Kobayashi, G.S., Pfaller, M.A. (1998) Staphylococcus and related organismn. In: Medical microbiology. 3rd ed. Mosby-year Book. St. Louis. USA.
Muyzer, G., de Waal, E.C. and Uitterlinden, A.G. (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59, 695-700.
Nakakita, Y., Ogawa, M. and Tsuchiya, Y. (2007) Primer for detecting Alicyclobacillus. US2007/0207458 A1. United States Patent.
Nakamura, Y., Yamamoto, N., Sakai, K. and Takano, T. (1995) Antihypertensive effect of sour milk and peptides isolated from it that are inhibitors to angiotensin I-converting enzyme. J. Dairy Sci. 78, 1253-1257.
Naser, S.M., Hagen, K.E., Vancanneyt, M., Cleenwerck, I., Swings, J. and Tompkins, T.A. (2006) Lactobacillus suntoryeus Cachat and Priest 2005 is a later synonym of Lactobacillus helveticus (Orla-Jensen 1919) Bergey et al. 1925 (Approved Lists 1980). Int. J. Syst. Evol. Microbiol. 56, 355-360.
Neyret, C., Lelievre, H., Lina, G., Vandenesch, F. and Etienne, J. (1997) Evaluation of a commercial test kit for rapid detection of Staphylococcus aureus in blood cultures. Eur. J. Clin. Microbiol. Infect. Dis. 16, 165-166.
Nielsen, D.S., Teniola, O.D., Ban-Koffi, L., Owusu, M., Andersson, T.S. and Holzapfel, W.H. (2007) The microbiology of Ghanaian cocoa fermentations analysed using culture-dependent and culture-independent methods. Int. J. Food Microbiol. 114, 168-186.
Noleto, A.L., Malburg Júnior, L.M. and Bergdoll, M.S. (1987) Production of staphylococcal enterotoxin in mixed cultures. Appl. Environ. Microbiol. 53, 2271-2274.
Norris, T.B., Wraith, J.M., Castenholz, R.W. and McDermott, T.R. (2002) Soil microbial community structure across a thermal gradient following a geothermal heating event. Appl. Environ. Microbiol. 68, 6300-6309.
Notermans, S. and Heuvulman, C.J. (1983) Combined effects of water activity, pH, and suboptimal temperature on growth and enterotoxin production. J. Food Sci. 48, 1832-1835.
Novick R.P., Schlievert, P. and Ruzin, A. (2001) Pathogenicity and resistance islands of staphylococci. Microbes Infect. 3, 585-594.
Nuñez, M., Bautista, L., Medina, M. and Gaya, P. (1988) Staphylococcus aureus, thermostable nuclease and staphylococcal enterotoxins in raw ewes'' milk Manchego cheese. J. Appl. Microbiol. 65, 29-34.
Ogier, J.C., Lafarge, V., Girard, V., Rault, A., Maladen, V., Gruss, A. Leveau, J.Y. and Delacroix-Buchet, A. (2004) Molecular fFingerprinting of dairy microbial ecosystems by use of temporal temperature and denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 70, 5628-5643.
Ohashi, Y., Nakai, S., Tsukamoto, T., Masumori, N., Akaza, H., Miyanaga, N., Kitamura, T., Kawabe, K., Kotake, T., Kuroda, M., Naito, S., Koga, H., Saito, Y., Nomata, K., Kitagawa, M. and Aso, Y. (2002) Habitual intake of lactic acid bacteria and risk reduction of bladder cancer. Urol. Int. 68, 273-280.
Oita, S. (2002) Control of thermoacidophilic Alicyclobacillus acidoterrestris by barley and wheat α- and β-thionins. Bull. Natl. Agric. Res. Cent. 1, 49-59.
Orr, R.V., Shewfelt, R.L., Huang, C.J., Tefera, S., and Beuchat, L.R. (2000) Detection of guaiacol produced by Alicyclobacillus acidoterrestris in apple juice by sensory and chromatographic analyses, and comparison with spore and vegetative cell populations. J. Food Prot. 63, 1517-1522.
Pettipher, G.L., Osmundson, M.E. and Murphy, J.M. (1997) Methods for the detection and enumeration of Alicyclobacillus acidoterrestris and investigation of growth and production of taint in fruit juice and fruit juice containing drinks. Lett. Appl. Microbiol. 24, 185-189.
Pinhatti, M.E.M.C., Variane, S., Eguchi, S.Y., and Manfio, G.P. (1997) Detection of acidothermophilic bacilli in industrialized fruit juices. Fruit Processing. 7, 350-353.
Poralla, K., and Knig, W.A. (1983) The occurrence of ω-cycloheptane fatty acids in a thermo-acidophilic bacillus. FEMS Microbiol. Lett. 16, 303-306.
Pot, B., Vandamme, P. and Kersters, K. (1994) Analysis of electrophoretic whole-organism protein fingerprints. In: Chemical Methods in Prokaryotic Systematics (Goodfellow, M. and O''Donnell, A.G., Eds.), pp. 493-521. John Wiley and Sons Ltd., Chichester.
Poyart, C., Quesne, G., Boumaila, C. and Trieu-Cuot, P. (2001) Rapid and accurate species-level identification of coagulase-negative staphylococci by using the sodA gene as a target. J. Clin. Microbiol. 39, 4296-4301.
Randazzo, C.L., Torriani, S., Akkermans, A.D.L., de Vos, W.M. and Vaughan, E.E. (2002) Diversity, dynamics, and activity of bacterial communities during production of an Artisanal Sicilian Cheese as evaluated by16S rRNA analysis. Appl. Environ. Microbiol. 68, 1882-1892.
Rantsiou, K., Iacumin, L., Canton, C., Comi, G. and Cocolin, L. (2005) Ecology and characterization by molecular methods of Staphylococcus species isolated from fresh sausages. Int. J. Food Microbiol. 97, 277- 284.
Rantsiou, K., Comi, G. and Cocolin, L. (2004) The rpoB gene as a target for PCR-DGGE analysis to follow lactic acid bacterial population dynamicsduring food fermentations. Food Microbiol. 21, 481-487.
Rayman, M.K., Park, C.E., Philpott, J. and Todd, E.C.D. (1975) Reassessment of the coagulase and thermostable nuclease tests as means of identifying Staphylococcus aureus. Appl. Microbiol. 29, 451-454.
Reeson, A.F., Jancovic, T., Kasper, M.L., Rogers, S. and Austin, A.D. (2003) Application of 16S rDNA-DGGE to examine the microbial ecology associated with a social wasp Vespula germanica. Insect Mol. Biol. 12, 85-91.
Reid, G., Kim, S.O. and Köhler, G.A. (2006) Selecting, testing and understanding probiotic microorganisms. FEMS Immunol. Med. Microbiol. 46, 149-157.
Reid, G. (1999) The scientific basis for probiotic strains of Lactobacillus. Appl. Environ. Microbiol. 65, 2763-3766.
Renneberg, J., Rieneck, K. and Gutschik, E. (1995) Evaluation of Staph ID 32 system and Staph-Zym system for identification of coagulase-negative staphylococci. J. Clin. Microbiol. 33, 1150-1153.
Renouf, V., Claisse, O. and Lonvaud-Funel, A. (2006) rpoB gene: A target for identification of LAB cocci by PCR-DGGE and melting curves analyses in real time PCR. J. Microbiol. Methods. 67, 162-170.
Roberson, J.R., Fox, L.K., Hancock, D.D. and Besser. T.E. (1992) Evaluation of methods for the differentiation of coagulase-positive staphylococci. J. Clin. Microbiol. 30, 3217-3219.
Robinson, R.K. and Tamime, A.Y. (1990) Microbiology of fermented milks. In: Dairy Microbiology, 2nd edn, Vol. 2, ed. RK Robinson, pp 291-343. London. Elsevier Applied Science.
Sáa, A.I., Vivas, J., Tinajas, A., Barbeyto, L. and Rodriguez, L.A. 1999. Evalution of the MicroSacn systems for identification of staphylococci. J. Basic. Microbiol. 5, 373-376.
Saarela, M., Mogensen, G., Fondén, R., Mättö, J. and Mattila-Sandholm, T. (2000) Probiotic bacteria: safety, functional and technological properties. J. Biotechnol. 84, 197-215.
Saavedra, J.M. (2001) Clinical applications of probiotic agents. Am.J. Clin. Nutr. 73(Suppl), 1147S-1151S.
Saide, J.A. and Gilliland, S.E. (2005) Antioxidative activity of lactobacilli measured by oxygen radical absorbance capacity. J. Dairy Sci. 88, 1352-1357.
Salminen, M.K., Rautelin, H., Tynkkynen, S., Poussa, T., Saxelin, M., Valtonen, V. and Järvinen, A. (2006) Lactobacillus bacteremia, species identification, and antimicrobial susceptibility of 85 blood isolates. Clin. Infect. Dis. 42, e35-e44.
Sander, M.E., Walker, D.C., Walker, K.M., Aoyama, K. and Klaenhammer, T.R. (1996) Performance of commercial cultures in fluid milk applications. J. Dairy Sci. 79, 943-955.
Schiffrin, E.J., Rochat, F., Link-Amster, H., Aeschlimann, J.M. and Donnet-Hughes, A. (1995) Immunomodulation of human blood cells following the ingestion of lactic acid bacteria. J. Dairy Sci. 78, 491-497.
Schleifer, K.H. and Ludwig, W. (1995) Phylogeny of the genus Lactobacillus and related genera. System. Appl. Microbiol. 18, 461-467.
Schmitt, M., Schuler-Schmid, U. and Scmidt-Lorenz, W. (1990) Temperature limits of growth, TNase, and enterotoxin production of Staphylococcus aureus strains isolated from foods. Int. J. Food Microbiol. 11, 1-19.
Scott K.F., Hageman, J.C., Morrison, M., Sanza, L.T., Como-Sabetti, K., Jernigan, J.A., Harriman, K., Harrison, L.H., Lynfield, R. and Farley, M.M. (2005) Methicillin-Resistant Staphylococcus aureus disease in three communities. N. Engl. J. Med. 352, 1436-1444.
Seifert, H., Oltmanns, D., Becker, K., Wisplinghoff, H. and von Eiff, C. (2005) Staphylococcus lugdunensis Pacemaker-related infection. Emerg. Infect. Dis. 11, 1283-1286.
Sekiguchi, H., Watanabe, M., Nakahara, T., Xu, B. and Uchiyama, H. (2002) Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis. Appl. Environ. Microbiol. 68, 5142-5150.
Sela, S., Yogev, D., Razin, S. and Bercovier, H. (1989) Duplication of the tuf gene: a new insight into the phylogeny of eubacteria. J. Bacteriol. 171, 581-584.
Sewell, C.M. and Clarridge, J.E. (1982) Clinical significance of coagulase- negative staphylococci. J. Clin. Microbiol. 16, 236-239.
Sghir, A., Gramet, G., Suau, A., Rochet, V., Pochart, P. and Dore, J. (2000) Quantification of bacterial groups within human fecal flora by oligonucleotide probe hybridization. Appl. Envir. Microbiol. 66, 2263-2266.
Shariff, G., Brennan, M.T., Kent M.L., Fox, P.C., Weinrib, D., Burgess, P. and Lockhart, P.B. (2004) Relationship between oral bacteria and hemodialysis access infection. Oral Surg. Oral Med. Oral Pathol. Oral Radiol. Endod. 98, 418-422.
Sherman, J.M. (1937) The streptococci. Bacteriol. Rev. 1, 3-97.
Simbahan, J., Drijber, R. and Blum, P. (2004) Alicyclobacillus vulcanalis sp. nov., a thermophilic, acidophilic bacterium isolated from Coso Hot Springs, California, USA. Int. J. Syst. Evol. Microbiol. 53, 1703-1707.
Simonová, M., Strompfová, V., Marciňáková, M., Lauková, A., Vesterlund, S., Moratalla, M.L., Bover-Cid, S. and Vidal-Carou, C. (2006) Characterization of Staphylococcus xylosus and Staphylococcus carnosus isolated from Slovak meat products. Meat Sci. 73, 559-564.
Simpson, J.M., Mccracken, V.J., Rex Gaskins, H. and Mackie, R.I. (2000) Denaturing gradient gel electrophoresis analysis of 16S ribosomal DNA amplicons to monitor changes in fecal bacterial populations of weaning pigs after introduction of Lactobacillus reuteri strain MM53. Appl. Environ. Microbiol. 66, 4705-4714.
Smole, S.C., Aronson, E., Durbin, A., Brecher, S.M. and Arbeit, R.D. (1998) Sensitivity and specificity of an improved rapid latex agglutination tests for identification of methicillin-sensitive and -resistant Staphylococcus aureus isolates. J. Clin. Microbiol. 36, 1109-1112.
Solis-Pereyra, B., Aattouri, N. and Lemonnier, D. (1997) Role of food in the stimulation of cytokine production. Am. J. Clin. Nutr. 66, 521S-525S.
Song, Y.L., Kato, N., Liu, C.X., Matsumiya, Y., Kato, H. and Watanabe, K. (2000) Rapid identification of 11 human intestinal Lactobacillus species by multiplex PCR assays using group and species- specific primers derived from the 16S-23S rRNA intergenic spacer region and its flanking 23S rRNA. FEMS Microbiol. Letters. 187, 167-173
Spano, G., Lonvaud-Funel, A., Claisse, O. and Massa, S. (2007) In Vivo PCR-DGGE analysis of Lactobacillus plantarum and Oenococcus oeni populations in red wine. Curr. Microbiol. 54, 9-13.
Speers, D.J., Olma, T.R. and Gilbert, G.L. (1998) Evaluation of four methods for rapid identification of Staphylococcus aureus from blood cultures. J. Clin. Microbiol. 36, 1032-1034.
Sperber, W.H. and Tatini, S.R. (1975) Interpretation of the tube coagulase test for identification of Staphylococcus aureus. Appl. Environ. Microbiol. 29, 502-505.
Splittstoesser, D.F., Churey, J.J., and Lee, C.Y. (1994) Growth characteristics of aciduric sporeforming bacilli isolated from fruit juices. J. Food Prot. 57, 1080-1083.
Stackebrandt, E., Ludwig, W., Weizenegger, M., Dorn, S., McGill, T.J., Fox, G.E., Woese, C.R., Schubert, W. and Schleifer, K.H. (1987) Comparative of 16S rRNA oligonucleotide analyses and murine type of roundspore-forming bacilli and non-sporeforming relatives. J. Gen. Microbiol. 133, 2523-2529.
Stackebrandt, E. and Teuber, M. (1988) Molecular taxonomy and phylogenetic position of lactic acid bacteria. Biochimie. 70, 317-324.
Stiles, M.E. and Holzapfel, W.H. (1997) Lactic acid bacteria of foods and their current taxonomy. Int. J. Food Micribiol. 36, 1-29.
Stoakes, L., John, M.A., Lannigan, R., Schieven, B.C., Ramos, M., Harley, D., Hussain, Z. (1994) Gas-liquid chromatography of cellular fatty acids for identification of staphylococci. J. Clin. Microbiol. 32, 1908-1910.
Stoughton, R.B. (2005) Applications of DNA microarrays in biology. Annu. Rev. Biochem. 74, 53-82.
Šuljagić, V., Čobeljić, M., Janković, S., Mirović, V., Marković-Denić, L., Romić, P. and Mikić, D. (2008) Nosocomial bloodstream infections in ICU and non-ICU patients. Am. J. Infect. Control. 33, 333-340.
Tamime, A.Y. (2002) Fermented milks: a historical food with modern applications-a review. Eur. J. Clin. Nutr. 56(Suppl4), S2-S15.
Tannock, G.W., Tilsala-Timisjarvi, A., Rodtong, S., Ng, J., Munro, K. and Alatossava, T. (1999) Identification of Lactobacillus isolates from the gastrointestinal tract, silage, and yogurt by 16S-23S rRNA gene intergenic spacer region sequence comparison. Appl. Environ. Microbiol. 65, 4264-4276.
Temmerman, R., Scheirlinck, I., Huys, G. and Swings, J. (2003) Culture- independent analysis of probiotic products by denaturing gradient gel electrophoresis. Appl. Envir. Microbiol. 69, 220-226.
Theunissen, J., Britz, T.J., Torriani, S.R. and Witthuhn, C. (2005) Identification of probiotic microorganisms in South African products using PCR-based DGGE analysis. Int. J. Food Microbiol. 98, 11-21.
Tirado, C. and Schmidt, K., 2001. WHO surveillance programme for control of food-borne infections and intoxications: preliminary results and trends across greater Europe. J. Infect. 43, 80-84.
Tsuruoka, N., Isono, Y., Shida, O., Hemmi, H., Nakayama, T. and Nishino, T. (2003) Alicyclobacillus sendaiensis sp. nov., a novel acidophilic, slightly thermophilic species isolated from soil in Sendai, Japan. Int. J. Syst. Evol. Microbiol. 53, 1081-1084.
Tynkkynen, S., Satokari, R., Saarela, M., Mattila-Sandholm, T. and Saxelin, M. (1999) Comparison of ribotyping, randomly amplified polymorphic DNA analysis, and pulsed-field gel electrophoresis in typing of Lactobacillus rhamnosus and L. casei strains. Appl. Environ. Microbiol. 65, 3908-3914.
Uchino, F. and Doi, S. (1967) Acido-thermophilic bacteria from thermal waters. Agric. Biol. Chem. 31, 817-822.
Udo, E.E., Al-Bustan, M.A., Jacob, L.E. and Chugh, T.D. (1999) Enterotoxin production by coagulase-negative staphylococci in restaurant workers from Kuwait City may be a potential cause of food poisoning. J. Med. Microbiol. 48, 819-23.
Valle, J., Gomez-Lucia, E., Piriz, S., Goyache, J., Orden, J.A. and Vadillo, S. (1990) Enterotoxin production by staphylococci isolated from healthy goats. Appl. Envir. Microbiol. 56, 1323-1326.
Van Beek, S. and Priest, F.G. (2002) Evolution of the lactic acid bacterial community during malt whisky fermentation: a polyphasic study. Appl. Environ. Microbiol. 68, 297-305.
Vandammc, P., Pot, B., Gillis, M., de Vos, P., Kersters, K. and Swings, I. (1996) Polyphasic taxonomy, a consensus approach to bacterial systematics. Microbiol. Rev. 60, 407-438.
Vandenesch, F., Lebeau, C., Bes, M., Lina, G., Lina, B., Greenland, T., Benito, Y., Brun, Y., Fleurette, J. and Etienne, J. (1994) Clotting activity in Staphylococcus schleiferi subspecies from human patients. J. Clin. Microbiol. 32, 388-392.
Vannuffel, P., Heusterspreute, M., Bouyer, M., Vandercam, B., Philippe, M. and Gala, J.L. (1999) Molecular characterization of femA from Staphylococcus hominis and Staphylococcus saprophyticus, and femA-based discrimination of staphylococcal species. Res. Microbiol. 150, 129-141.
Ventura, M., Canchaya, C., Meylan, V., Klaenhammer, T.R. and Zink, R. (2003) Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification. Appl. Environ. Microbiol. 69, 6908-6922.
Veras, J.F., do Carmo, L.S., Tong, L.C., Shupp, J.W., Cummings, C., Dos Santos, D.A., Cerqueira, M.M., Cantini, A, Nicoli, J.R. and Jett, M. (2008) A study of the enterotoxigenicity of coagulase-negative and coagulase-positive staphylococcal isolates from food poisoning outbreaks in Minas Gerais, Brazil, Int. J. Infect. Dis. doi:10.1016/j.ijid.2007.09.018
Vernozy Rozand, C., Mazuy, C., Prevost, G., Lapeyre, C., Bes, M., Brun, Y. and Fleurette, J. (1996) Enterotoxin production by coagulase-negative staphylococci isolated from goats’ milk and cheese. Int. J. of Food Microbiol. 30, 271-280.
Viljanen, M., Pohjavuori, E., Haahtela, T., Korpela, R., Kuitunen, M., Sarnesto, A., Vaarala, O. and Savilahti, E. (2005) Induction of inflammation as a possible mechanism of probiotic effect in atopic eczema-dermatitis syndrome. J. Allergy Clin. Immunol. 115, 1254-1259.
Villani, F., Casaburi, A., Pennacchia, C., Filosa, L., Russo, F. and Ercolini, D. (2007) Microbial ecology of the Soppressata of Vallo di Diano, a traditional dry fermented sausage from southern Italy, and in vitro and in situ selection of autochthonous starter cultures. Appl. Environ. Microbiol. 73, 5453-5463.
Vuong, C. and Otto, M. (2002) Staphylococcus epidermidis infections. Microbes Infect. 4, 481-489.
Vuong, C., Voyich, J.M., Fischer, E.R., Braughton, K.R., Whitney, A.R., de Leo F.R. and Otto, M. (2004) Polysaccharide intercellular adhesin (PIA) protects Staphylococcus epidermidis against major components of the human innate immune system. Cell. Microbiol. 6, 269-275.
Walls, I., and Chuyate, R. (1998) Alicyclobacillus-Historical perspective and preliminary characterization study. Dairy Food Environ. Sanit. 18, 499-503.
Walls, I. and Chuyate, R. (2000a) Spoilage of fruit juices by Alicyclobacillus acidoterrestris. Food Aust. 52, 286-288.
Walls, I., and Chuyate, R. (2000b) Isolation of Alicyclobacillus acidoterrestris from fruit juices. J. AOAC Int. 83, 1115.
Walter, J., Tannock, G.W., Tilsala-Timisjarvi, A., Rodtong, S., Loach, D.M., Munro, K. and Alatossava, T. (2000) Detection and identification of gastrointestinal Lactobacillus species by using denaturing gradient gel electrophoresis and species-specific PCR primers. Appl. Environ. Microbiol. 66, 297-303.
Walter, J., Hertel, C., Tannock, G.W., Lis, C.M., Munro, K. and Hammes, W.P. (2001) Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis. Appl. Envir. Microbiol. 67, 2578-2585.
Wang, R.F., Beggs, M.L., Robertson, L.H. and Cerniglia, C.E. (2002) Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples. FEMS Microbiol. Lett. 213, 175-182.
Wertheim, H.F.L., Vos, M.C., Ott, A., van Belkum, A., Voss, A., Kluytmans, J., van Keulen, P., Vandenbroucke-Grauls, C., Meester, M. and Verbrugh, H. (2004) Risk and outcome of nosocomial Staphylococcus aureus bacteraemia in nasal carriers versus non-carriers. Lancet. 364, 703-705.
Weinstein, M.P., Towns, M.L., Quartey, S.M., Mirrett, S., Reimer, L.G., Parmigiani, G. and Reller, L.B. (1997) The clinical significance of positive blood cultures in the 1990s: a prospective comprehensive evaluation of the microbiology, epidemiology, and outcome of bacteremia and fungemia in adults. Clin. Infect. Dis. 24, 582-602.
Wilkerson, M., McAllister, S., Miller, J.M., Heiter, B.J. and Bourbeau, P.P. (1997) Comparison of five agglutination tests for identification of Staphylococcus aureus. J. Clin. Microbiolo. 35, 148-151.
Wisotzkey, J.D., Jurtshuk, P., Fox, G.E., Deinhard, G. and Poralla, K. (1992) Comparative sequence analyses on the 16SrRNA(rDNA) of Bacillus acidocaldarius, Bacillus acidoterrestris, and Bacillus cycloheptanicus and proposal for creation of a new genus, Alicyclobacillus gen. nov. Int. J. Sys. Bacteriol. 42, 263-269.
Yamazaki, K., Teduka, H., Inoue, N. and Shinano, H. (1996) Specific primers for detection of Alicyclobacillus acidoterrestris by RT-PCR. Lett. Appl. Microbiol. 23, 350-354.
Yamazaki, K., Okubo, T., Inoue, N., and Shinano, H. (1997) Randomly amplified polymorphic DNA (RAPD) for rapid identification of the spoilage bacterium Alicyclobacillus acidoterrestris. Biosci. Biotech. Biochem. 61, 1016-1018.
Yamazaki, K., Kawai, Y., Inoue, N., and Shinano, H. (1997) Influence of sporulation medium and divalent ions on the heat resistance of Alicyclobacillus acidoterrestris spores. Lett. Appl. Microbiol. 25, 153-156.
Yamazaki, K., Murakami, M., Kawai, Y., Inoue, N., and Matsuda, T. (2000) Use of nisin for inhibition of Alicyclobacillus acidoterrestris in acidic drinks. Food Microbiol. 17, 315-320.
Yazdankhah, S.P., Hellemann, A.L. , Rønningen, K. and Olsen, E. (1998) Rapid and sensitive detection of Staphylococcus species in milk by ELISA based on monodisperse magnetic particles. Vet. Microbiol. 62, 17-26.
Zakrzewska-Czerwinska, J., Gaszewska-Mastalarz, A., Pulverer, G. and Mordarski, M. (1992) Identification of Staphylococcus epidermidis using a 16S rRNA-directed oligonucleotide probe. FEMS Microbiol. Lett. 79, 51-58.
Zetolab, N., Francisa, J.S., Nuermbergera, E.L. and Bishaia, W.R. (2005) Community-acquired meticillin-resistant Staphylococcus aureus: an emerging threat. Lancet Infect. Dis. 5, 275-286.
Zhong, W., Millsap, K., Bialkowska-Hobrzanska, H. and Reid, G. (1998) Differentiation of Lactobacillus species by molecular typing. Appl. Environ. Microbiol. 64, 2418-2423.
Zoetendal, E.G., von Wright, A., Vilpponen-Salmela, T., Ben-Amor, K., Akkermans, A.D. and de Vos, W.M. (2002) Mucosaassociated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl. Environ. Microbiol. 68, 3401-3407
Zschöck, M., Nesseler, A. and Sudarwanto, I. (2005) Evaluation of six commercial identification kits for the identification of Staphylococcus aureus isolated from bovine mastitis. J. Appl. Microbiol. 98, 450-455.