|
1.Russo VEA et al. Epigenetic mechanisms of gene regulation. In Cold Spring Harbor Monograph Series. Cold Spring Harbor Laboratory Press xii. 1996; 692p. 2.Altun GA, Laurent LC, Loring JF. Epigenetic remodeling and stem cells. Drug Discovery Today: Technologies 2008;5(4): e139-42. 3.Shemer R, Birger Y, Dean WL, Reik W, Riggs AD, Razin A. Dynamic methylation adjustment and counting as part of imprinting mechanisms. Proc Natl Acad Sci USA 1996;93:6371-76. 4.Waddington CH. The epigenotype. Endeavour 1942;1:18-20. 5.Juliandi B, Abematsu M, Nakashima K. Epigenetic regulation in neural stem cell differentiation. Develop Growth Differ 2010;52:493-504. 6.Strahl BD & Allis CD. The language of covalent histone modifications. Nature 2000;403:41-45. 7.Sun G, Fu C, Shen C, Shi YH. Histone deacetylases in neural stem cells and induced pluripotent stem cells. Beckman Research Institute of City of Hope, Duarte, CA 91010 2011. 8.Guccione E, Martinato F, Finocchiaro G, Luzi L, Tizzoni L, Dall’ Ohlio V et al. Myc-binding-site recognition in the human genome is determined by chromatin context. Nat Cell Biol 2006;8:764-70. 9.Fan SC, Zhang MQ, Zhang XG. Histone methylation marks play important roles in predicting methylation status of CpG islands. Biochem Biophys Res Commun 2008;374:559-64. 10.Sinkkonen L, Hugenschmidt T, Berninger P, Gaiadatzis D et al. MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells. Nat Struc Mol Biol 2008;15(8):259–67. 11.Sato F, Tsuchiya S, Meltzer SJ, Shimizu K. MicroRNAs and epigenetics. FEBS Journal 2011;278:1598-1609. 12.Peters J & Robson JE. Imprinted noncoding RNAs. Mamm Genome 2008;19:493-502. 13.Noonan EJ, Place RF, Pookot D, Basak S, Whitson JM, Hirata H et al. miR-449a targets HDAC-1 and induces growth arrest in prostate cancer. Oncogene 2009;28:2738-44. 14.Chen JF, Mandel EM, Thomson JM, Wu Q, Callis TE, Hammond SM et al. The role of microRNA-1 and micro-RNA133 in skeletal muscle proliferation and differentiation. Nat Genet 2005;38:228-33. 15.Fabbri M, Garzon R, Cimmino A, Liu ZF, Zanesi N, Callegari E et al. MicroRNA-29 family reverts aberrant methylation in lung cancer by targeting DNA methyltransferases 3A and 3B. PNAS 2007;104(40):15805-810. 16.Garzon R, Liu SJ, Fabbri M, Liu ZF, Heaphy CE, Callegari E et al. MicroRNA-29b induces global DNA hypomethylation and tumor suppressor gene reexpression in acute myeloid leukemia by targeting directly DNMT3A and 3B and indirectly DNMT1. Blood 2009;113(25):6411-18. 17.Kass SU, Pruss D, Wolffe AP. How does DNA methylation repress transcription? TIG 1997;13(11):444-49. 18.Bird AP & Wolffe AP. Methylation-induced repression—belts, braces, and chromatin. Cell 1999;99:451-54. 19.Klose RJ & Bird AP. Genomic DNA methylation: the mark and its mediators. TIBS 2006;31(2):89-97. 20.Jaenisch R. DNA methylation and imprinting: why bother? TIG 1997;13(8):323-39. 21.Newell-Price J, Clark AJL, King P. DNA methylation and silencing of gene expression. TEM 2000;11(4):142-48. 22.Garvilles RG. Genome-wide methylation pattern search in Prader-Willi Syndrome (PWS) patients. Chung Yuan Christian University, Taiwan 2011. 23.Bird AP. CpG-rich islands and the function of DNA methylation. Nature 1986;321:209-13. 24.Tasheva ES & Roufa DJ. Densely methylated DNA islands in mammalian chromosomal replication origins. Mol Cell Biol 1994;14(9):5636-44. 25.Collas P, Noer A, Timoskainen S. Programming the genome in embryonic and somatic stem cells. J Cell Mol Med 2007;11(4):602-20. 26.Hermann A, Schmitt S, Jeltsch A. The human Dnmt2 has residual DNA-(cytosine-C5) methyltransferase activity. J Biol Chem 2003;278(34):31717-21. 27.Okano M, Xie SP, Li E. Dnmt2 is not required for de novo and maintenance methylation of viral DNA in embryonic stem cells. Nucleic Acids Res 1998;26:2536-40. 28.Suetake I, Shinozaki F, Miyagawa J, Takeshima H, Tajima S. DNMT3L stimulates the DNA methylation activity of Dnmt3a and Dnmt3b through a direct interaction. J Biol Chem 2004;279(26):27816-23. 29.Qiu C, Sawada K, Zhang X, Cheng XD. The PWWP domain of mammalian DNA methyltransferase Dnmt3b defines a new family of DNA-binding folds. Nat Struct Biol 2002;9:217-24. 30.Chen TP, Tsujimoto N, Li E. The PWWP domain of Dnmt3a and Dnmt3b is required for directing DNA methylation to the major satellite repeats at pericentric heterochromatin. Mol Cell Biol 2004;24(20):9048-58. 31.Shirohzu H, Kubota T, Kumazawa A, Sado T, Chijiwa T, Inagaki K et al. Three novel DNMT3B mutations in Japanese patients with ICF syndrome. Am J Med Genet 2002;112:31-37. 32.Di Croce L, Raker VA, Corsaro M, Fazi F, Fanelli M, Faretta M et al. Methyltransferase recruitment and DNA hypermethylation of target promoters by an oncogenic transcription factor. Science 2002;295(5557):1079-82. 33.Brenner C, Deplus R, Didelot C, Loriot A, Viré E, De Smet C et al. Myc represses transcription through recruitment of DNA methyltransferase corepressor. EMBO J 2005;24(2):336-46. 34.Castanotto D, Tommasi S, Li MJ, Li HT, Yanow S, Pfeifer GP et al. Short hairpin RNA-directed cytosine (CpG) methylation of the RASSF1A gene promoter in HeLa cells. Mol Ther 2005;12:179-83. 35.Morris KV, Chan SW-L, Jacobsen SE, Looney DJ. Small interfering RNA-induced transcriptional gene silencing in human cells. Science 2004;305(5688):1289-92. 36.Kanellopoulou C, Muljo SA, Kung AL, Ganesan S, Drapkin R, Jenuwein T et al. Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing. Genes Dev 2005;19(4):489-501. 37.Johe KK, Hazel TG, Muller T, Dugich-Djordjevic MM, McKay RD. Single factors direct the differentiation of stem cells from the fetal and adult central nervous system. Genes Dev 1996;10:3129-40. 38.Texeira AI, Duckworth JK, Hermanson O. Getting the right stuff: controlling neural stem cell and fate in vivo and in vitro with biomaterials. Cell Res 2007;17:56-61. 39.Rajan P, Panchision DM, Newell LF, McKay RD. BMPs signal alternately through a SMAD or FRAP-STAT pathway to regulate fate choice in CNS stem cells. J Cell Biol 2003;161(5):911-21. 40.Levison SW, Druckman SK, Young GM, Basu A. Neural stem cells in the subventricular zone are a source of astrocytes and oligodendrocytes, but not microglia. Dev Neurosci 2003;25:184-196. 41.Liebau S, Vaida B, Storch A, Boeckers TM. Maturation of synaptic contacts in differentiating neural stem cells. Stem cells 2007;25:1720-29. 42.Seaberg RM, van der Kooy D. Adult rodent neurogenic regions: the ventricular subependyma contains neural stem cells, but the dentate gyrus contains restricted progenitors. J Neurosci 2002;22(5):1784-93. 43.Bull ND, Bartlett PF. The adult mouse hippocampal progenitor is neurogenic but not a stem cell. J Neurosci 2005;25(47):10815-21. 44.Kempermann G. Adult neurogenesis. Oxford University Press, New York 2006. 45.Reynolds BA & Weiss S. Generation of neurons and astrocytes from isolated cells of the adult mammalian central nervous system. Science 1992;255(5052):1707-10. 46.Galli R, Gritti A, Bonfanti L, Vescovi AL. Neural stem cells: an overview. Circ Res 2003;92:598-608. 47.Taupin P. Neural progenitor and stem cells in the adult central nervous system. Ann Acad Med Singapore 2006a;35(11):814-20. 48.Taupin P. Therapeutic potential of adult neural stem cells. Recent Pat CNS Drug Dev 2006b;1:299-303. 49.Fujita S. The discovery of the matrix cell, the identification of the multipotent neural stem cell and the development of the central nervous system. Cell Struct Funct 2003;28(4):205-28. 50.Noctor SC, Matínez-Cerdeño V, Ivic l, Kriegstein AR. Cortical neurons arise in symmetric and asymmetric division zones and migrate through specific phases. Nat Neurosci 2004;7(2):136-44. 51.Sanai N, Tramontin AD, Quiñones-Hinojosa A, Barbaro NM, Gupta N, Kunwar S et al. Unique astrocyte ribbon in adult human brain contains neural stem cells but lacks chain migration. Nature 2004;427(6976):740-44. 52.Doetsch F, Caillé I, Lim DA, García-Verdugo JM, Alvarez-Buylla A. Subventricular zone astrocytes are neural stem cells in the adult mammalian brain. Cell 1999;97:703-16. 53.Alvarez-Buylla A, García-Verdugo JM, Tramontin AD. A unified hypothesis on the lineage of neural stem cells. Nature Rev Neurosci 2001;2(4):287-93. 54.Noctor SC, Flint AC, Weissman TA, Dammerman RS, Kriegstein AR. Neurons derived from radial glial cells establish radial units in neocortex. Nature 2001;409(6821):714-20. 55.Potten CS, Loeffler M. Stem cells: attributes, cycles, spirals, pitfalls and uncertainties. Lessons for and from the crypt. Development 1990;110(4):1001-20. 56.Wen S, Li H, Liu J. Dynamic signaling for neural stem cell fate determination. Cell Adhesion Comm 2009;3(1):107-17. 57.Christopherson GT, Song HJ, Mao H-Q. The influence of fiber diameter of electrospun substrates on neural stem cell differentiation and proliferation. Biomaterials 2009;30:556-64. 58.Trujillo CA, Schwindt TT, Martins AH, Alves JM, Mello LE, Ulric H. Novel perspectives of neural stem cell differentiation: from neurotransmitters to therapeutics. Cytometry Part A 2009;75A:38-53. 59.Doetsch F. A niche for adult neural stem cells. Curr Opin Genet Dev 2003;13:543-50. 60.Hogg RC, Chipperfield H, Whyte KA, Stafford MR, Hansen MA, Cool SM et al. Functional maturation of of isolated neural progenitor stem cells from the adult rat hippocampus. Eur J Neurosci 2004;19:2410-20. 61.Cheng XX, Wang ZC, Chen XY, Sun Y, Kong QY, Liu J et al. Correlation of Wnt-2 expression and beta-catenin intracellular accumulation in Chinese gastric cancers: relevance with tumour dissemination. Cancer Lett 2005;223:339-47. 62.Kasai M, Satoh K, Akiyama T. Wnt signaling regulates the sequential onset of neurogenesis and gliogenesis via induction of BMPs. Gene Cells 2005;10:777-83. 63.Miyazono K, Maeda S, Imura T. BMP receptor signaling: transcriptional targets, regulation of signals and signaling cross-talk. Cytokine Growth Factor Rev 2005;16:251-63. 64.Stipursky J, Gomes FC. TGFbeta1/SMAD signaling induces astrocyte fate commitment in vitro: implications for radial glia development. Glia 2007;55:1023-33. 65.Fukuda S, Abematsu M, Mori H, Yanagisawa M, Kanagawa T, Nakashima K et al. Potentiation of astrogliogenesis by STAT3-mediated activation of bone morphogenic protein-smad signaling in neural stem cells. Mol Cell Biol 2007;27;4931-37. 66.Taylor MK, Yeager K, Morrison SJ. Physiological Notch signaling promotes gliogenesis in the developing peripheral and central nervous systems. Development 2007;134:2435-47. 67.Aoki Y, Feldman GM, Tosato G. Inhibition of STAT3 signaling induces apoptosis and decreases surviving expression in primary effusion lymphoma. Blood 2003;101(4):1535-42. 68.Takizawa T, Nakashima K, Namihara M, Ochiai W, Uemura A, Yanagisawa M et al. DNA methylation is a critical cell-intrinsic determinant of astrocyte differentiation in the fetal brain. Dev Cell 2001;1(6):749-58. 69.Hatton BA, Knoepfler PS, Kenney AM, Rowitch DH, de Alborán IM, Olson JM et al. N-myc is an essential downstream effector of Shh signaling during both normal and neoplastic cerebellar growth. Cancer Res 2006;66:8655-61. 70.Fuccillo M, Joyner AL, Fishell G. Morphogen to mitogen: the multiple roles of hedgehog signaling in vertebrate neural development. Nature Rev Neurosci 2006;7:772-83. 71.Shimozaki K, Namihara M, Nakashima K, Taga T. Stage- and stie-specific DNA methylation during neural cell development from embryonic stem cells. J Neurochem 2005;93:432-39. 72.Fan G, Martinowich K, Chin MH, He F, Fouse SD, Hutnick L et al. DNA methylation controls the timing of astriogliogenesis through regulation of JAK-STAT signaling. Development 2005;132:3345-56. 73.Jung BP, Zhang G, Ho W, Francis J, Eubanks JH. Transient forebrain ischemia alters the mRNA expression of methyl DNA-binding factors in the adult rat hippocampus. Neuroscience 2002;115:515-24. 74.Kishi N, Macklis JD. MECP2 is progressively expressed in post-migratoy neurons and is involved in neuronal maturation rather than cell fate decisions. Mol Cell Neurosci 2004;27306-21. 75.Setoguchi H, Namihara M, Kohyama J, Asano H, Sanosaka T, Nakashima K. Methyl-CpG binding proteins are involved in restricting differentiation plasticity in neurons. J Neurosci Res 2006;84:969-79. 76.Kohyama J, Kojima T, Takatsuka E, Yamashita T, Namiki J, Hsieh J et al. Epigenetic regulation of neural cell differentiation plasticity in the adult mammalian brain. Proc Natl Acad Sci USA 2008;105:18012-17. 77.Ye F, Chen Y, Hoang TN, Montgomery RL, Zhao X, Bu H et al. HDAC1 and HDAC2 regulate oligodendrocyte differentiation by disrupting the ß-catenin-TCF interaction. Nat Neurosci 2009;12:829-38. 78.Song MR, Ghosh A. FGF2-induced chromatin remodeling regulates CNTF-mediated gene expression and astrocyte differentiation. Nat Neurosci 2004;7:229-35. 79.Xia ZB, Anderson M, Diaz MO, Zeleznik-Le NJ. MLL repression domain interacts with histone deacetylases, the polycomb group proteins HPC2 and BMI-1, and the co-repressor C-terminal-binding protein. Proc Natl Acad Sci USA 2003;100:8342-47. 80.Hirabayashi Y, Suzuki N, Tsuboi M, Endo TA, Toyoda T, Shinga J et al. Polycomb limits the neurogenic competence of neural precursor cells to promote astrogenic fate transtition. Neuron 2009;63:600-13. 81.Holmberg A, Blomstergren A, Nord O, Lukacs M, Lunderberg J, Uhlén M. The biotin-streptavidin interaction can be reversibly broken using water at elevated temperatures. Electrophoresis 2005;26(3):501-10. Jehle J, Schweizer PA, Katus HA, Thomas D. Novel roles for hERG K+ channels in cell proliferation and apoptosis. Cell death and disease 2011;2: 1-8. 82.Santoro B, Grant SGN, Bartsch D, Kandel ER. Interactive cloning with the SH3 domain of N-src identifies a new brain specific ion channel protein, with homology to Eag and cyclic nucleotide-gated channels. Proc. Nat. Acad. Sci. 1997;94: 14815-20. 83.Ramalho-Santos M, Yoon S, Matsuzaki Y, Mulligan RC, Melton DA. “Stemness”: transcriptional profiling of embryonic and adult stem cells. Science 2002;298(5593):597-600. 84.Ryser S, Glauser D, Vigier M, Zhang YQ, Tachini P, Schlegel W. et al. Gene expression profiling of rat spematogonia and Sertoli cells reveals signaling pathways from stem cells to niche and testicular cancer cells to surrounding stroma. BMC Genomics 2011;12:29. 85.Sainz J, García-Alcalde F, Blanco A, Concha A. Genome-wide gene expression analysis in mouse embryonic stem cells. Int J Dev Biol 2012;55: 995-1006. 86.Jarzynka MJ, Hu B, Hui K-M, Bar-Joseph I, Gu WS, Takanori H. ELMO1 and Dock180, a bipartite Rac1 guanine nucleotide exchange factor, promote human glioma cell invasion. Cancer Res 2007;67(15):7203-11. 87.Lu Z, Elliott MR, Chen Y, Walsh JT, Klibanov AL, Ravichandran KS et al. Phagocytic activity of neuronal progenitors regulates adult neurogenensis. Nat Cell Biol 2011;13(9):1076-83. 88.Josephson R, Müller T, Pickel J, Okabe S, Reynolds K, Turner PA et al. POU transcription factors control expression of CNS stem cell-specific genes. Development 1998;125:3087-100. 89.Walker DJ, Suetterlin P, Reisenberg M, Williams G, Doherty P. Down-regulation of diacylglycerol lipase-alpha during neural stem cell differentiation: identification of elements that regulate transcription. J Neurosci Res 2010;88(4):735-45. 90.Pawlisz AS, Feng Y. Three-dimensional regulation of radial glial functions by Lis1-Nde1 and dystrophin glycoprotein complexes. PLoS Bioli 2011;9(10):e1001172. 91.Lee H-J, Sakamoto H, Luo HW, Friel AM, Niikura T, Tilly JC. et al. Loss of CABLES1, a cyclin-dependent kinase-interacting protein that inhibits cell cycle progression, results in germline expansion at the expense of oocyte quality in adult female mice. Cell Cycle 6 2007;21:2678-2684. 92.Groeneweg JW, White YA, Kokel D, Peterson RT, Zukerberg LR, Berin I et al. Cables1 is required for embryonic neural development: molecular, cellular, and behavioral evidence from the zebrafish. Mol Reprod Dev 2011;78(1):22-32. 93.Choi MR, Jung KH, Park JH, Das ND, Chung MK, Choi IG et al. Ethanol-induced small heat shock protein genes in the differentiation of mouse embryonic neural stem cells. Arch Toxicol 2011;85:293-304. 94.Kanai Y, Okada Y, Tanaka Y, Harada A, Terada S, Hirokawa N. KIF5C, a novel neuronal kinesin enriched in motor neurons. J Neurosci 2000;20(17):6374-84. 95.Killian RL, Flippin JD, Herrera CM, Almenar-Queralt A, Goldstein LS. Kinesin light chain 1 suppression impairs human embryonic stem cell neural differentiation and amyloid precursor protein metabolism. PLoS ONE 2012;7(1):e29755. 96.Witt O, Deubzer HE, Milde T, Oehme I. HDAC family: what are the cancer relevant targets? Cancer Letters 2009;277:8-21. 97.Lee H, Villagra SA, Rezai-Zadeh N, Seto E. Histone deacetylase 8 safeguards the human ever-shorter telomeres 1B (hEST1B) protein from ubiquitin-mediated degradation. Mol Cell Biol 2006;26:5259-69. 98.Kulahin N, Walmod PS. The neural cell adhesion molecule NCAM2/OCAM/RNCAM, a close relative to NCAM. V. Berezin (ed.) Adv Exp Med Biol 663:403-20. 99.Wang CC, Kadota M, Nishigaki R, Kazuki Y, Shirayoshi Y, Rogers MS et al. Molecular hierarchy in neurons differentiated from mouse ES cells containing a single human chromosome 21. Biochem Biophys Res Comm 2004;314:335-50. 100.Liu YQ, Clem B, Zuba-Surma EK, El-Naggar S, Telang S, Jenson AB. Mouse fibroblasts lacking RB1 function form spheres and undergo reprogramming to a cancer stem cell phenotype. Cell Stem Cell 2009;4(4):336-47. 101.de Bont JM, Packer RJ, Michiels EM, den Boer ML, Pieters R. Biological background of pediatric medulloblastoma and ependymoma: a review from a translational research perspective. Neuro Oncol 2008;10(6):1040-60. 102.Krzyzanowski PM, Andrade-Navarro MA. Identification of novel stem cell markers using gap analysis of gene expression data. Genome Biology 2007;8(9):R193. 103.Muruganandan S, Roman AA, Sinal CJ. Role of chemerin/CMKLR1 signaling in adipogenesis and osteoblastogenesis of bone marrow stem cells. J Bone Miner Res 2010;25(2):222-34. 104.Yang VS, Carter SA, Hyland SJ, Tachibana-Konwalski K, Laskey RA, Gonzalez MA. Geminin escapes degradation in G1 of mouse pluripotent cells and mediates the expression of Oct4, Sox2, and Nanog. Curr Biol 2011;21:692-99. 105.Mohn F, Weber M, Rebhan M, Roloff TC, Richter J, Stadler MB et al. Lineage-specific Polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors. Molecular Cell 2008;30(6):755-66. 106.Liu YQ, El-Naggar S, Darling DS, Higashi Y, Dean DC. ZEB1 links epithelial-mesenchymal transition and cellular senescence. Development 2008;135(3):579-88. 107.Ringrose L, Ehret H, Paro R. Distinct contributions of histone H3 lysine 9 and 27 methylation to locus-specific stability of polycomb complexes. Mol Cell 2004;16;641-53. 108.Sabourin J-C, Ackema KB, Ohayon D, Guichet P-O, Perrin FE et al. A mesenchymal-like ZEB1(+) niche harbors dorsal radial fibrillary acidic protein-positive stem cells in the spinal cord. Stem Cells 2009;27(11):2722-33. 109.Kawauchi T, Chihama K, Nabeshima Y, Hoshino M. The in vivo roles of STEF/Tiam1, Rac1, and JNK in cortical neuronal migration. EMBO J 2003;22(16):4190-4201. 110.Leone DP, Srinivasan K, Brakebusch C, McConnell SK. The Rho GTPase Rac1 is required for proliferation and survival of progenitors in the developing forebrain. Dev Neurobiol 2010;70(9):659-78. 111.Kamimoto T, Zama T, Aoki R, Muro Y, Hagiwara M. Identification of a novel kinesin-related protein, KRMP1, as a target for mitotic peptidyl-prolyl isomerase Pin1. J Biol Chem 2001;276:37520-28. 112.Moretto-Zita M, Jin H, Shen ZX, Zhao TB, Briggs SP, Xu Y. Phosphorylation stabilizes Nanog by promoting its interaction with Pin1. PNAS 2010;107(30):13312-17. 113.Lienert F, Mohn F, Tiwari VK, Baubec T, Roloff TC, Gaidatzis D et al. Genomic prevalence of heterochromatic H3K9me2 and transcription do not discriminate pluripotent from terminally differentiated cells. PLos ONE 2011;7(6):e1002090. 114.Aoki M, Yamashita T, Tohyama M. EphA receptors direct the differentiation of mammalian neural precursor cells through a mitogen-activated protein kinase-dependent pathway. J Biol Chem 2004;279:32643-50. 115.Harries RE, Pargett M, Sutcliffe C, Umulis D, Ashe HL. Brat promotes stem cell differentiation via control of a bistable switch that restricts BMP signaling. Dev Cell 2011;20(1):72-83. 116.Pfister S, Jones VJ, Power V, Truisi GL, Khoo P-L, Steiner KA et al. Sox17-dependent gene expression and early heart and gut development in Sox17-deficient mouse embryos. Int J dev Biol 2011;55:45-58. 117.Sohn J, Natale J, Chew L-J, Belachew S, Cheng Y, Aguirre A et al. Identification of Sox17 as a transcription factor that regulates oligodendrocyte development. J Neurosci 2006;26(38):9722-35. 118.Hermanson O, Jepsen K, Rosenfeld MG. N-CoR controls differentiation of neural stem cells into astrocytes. Nature 2002;419:934-39. 119.Kriks S, Shim J-W, Piao JH, Ganat YM, Xie Z, Carrillo-Reid L et al. Dopamine neurons derived from human ES cells efficiently engraft in animal models of Parkinson’s disease. Nature 2011;480:547-51. 120.Courtois ET, Castillo CG, Seiz EG, Ramos M, Bueno C, Liste I et al. In vitro and in vivo enhanced generation of human A9 dopamine neurons from neural stem cells by Bcl-XL. J Biol Chem 2010;285:9881-97. 121.Takahashi A, Tsutsumi R. Kikuchi I, Obuse C, Saito Y, Seidi A et al. SHP2 tyrosine phosphatase converts parafibromin/Cdc73 from a tumor suppressor to an oncogenic driver. Molecular Cell 2011;43(1):45-56. 122.Kawamori H, Tai M, Sato M, Yasugi T, Tabata T. Fat/Hippo pathway regulates the progress of neural differentiation signaling in the Drosophila optic lobe. Develop Growth Differ 2011;53:653-67. 123.Höglund PJ, Nordström JV, Schiöth HB, Fredriksson R. The solute carrier families have a remarkably long evolutionary history with the majority of the human families present before divergence of bilaterian species. Mol Biol Evol 2011;28(4):1531-41. 124.Freed WJ, Chen J, Bäckman CM, Schwartz CM, Vazin T, Cai J et al. Gene expression profile of neuronal progenitor cells derived from hESCs: activation of chromosome 11p15.5 and comparison to human dopaminergic neurons. PLoS ONE 2008;3(1):e1422 (1-12). 125.Pacey LK, Doss L, Cifelli C, van der Kooy D, Heximer SP, Hampson DR. Genetic deletion of regulator of G-protein signaling 4 (RGS4) rescues a subset of fragile X related phenotypes in the FMR1 knockout mouse. Mol Cell Neurosci 2011;46(3):563-72. 126.Grillet N, Pattyn A, Contet C, Kieffer BL, Goridis C, Brunet J-F. Generation and characterization of Rgs4 mutant mice. 127.McDonel P, Costello I, Hendrich B. Keeping things quiet: roles of NuRD and Sin3 co-repressor complexes during mammalian development. Int J Biochem Cell Biol 2009;41(1):108-16. 128.Cook JR, Lee J-H, Yang Z-H, Krause CD, Herth N, Hoffmann R et al. FBXO11/PRMT9, a new arginine methyltransferase, symmetrically dimethylates arginine residues. Biochem Biophys Res Commun 2006;342(2):472-81. 129.Böeda B, El-Amraoui A, Bahloul A, Goodyear R, Daviet L, Blanchard S et al. MyosinVIIa, harmonin and cadherin 23, three UsherI gene products that cooperate to shape the sensory hair cell bundle. EMBO J 2002;21(24):6689-99. 130.Quan Y, Ji Z-L, Wang X, Tartakoff AM, Tao T. Evolutionary and transcriptional analysis of karyopherin ß superfamily proteins. MCP Papers in Press 2008. 131.Kinchen JM, Ravichandran KS. Identification of two evolutionary conserved genes regulating processing of engulfed apoptotic cells. Nature 2010; 464(7289): 778-82. 132.May-Panloup P, Hôtellier VF, Morinière C, Marcaillou C, Lemerle S, Malinge M-C et al. Molceular characterization of corona radiate cells from patients with diminished ovarian reserve using microarray and microfluidic-based gene expression profiling. Hum Reprod 2012. 133.Johnson MM, Michelhaugh SK, Bouhamdan M, Schmidt CJ, Bannon MJ. The transcription factor NURR1 exerts concentration-dependent effects on target genes mediating distinct biological processes. Front Neurosci 2011;5(135):1-11. 134.Diatchenko L, Lau Y-FC, Campbell AP, Chenchik A. Moqadam F, Huang B et al. Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc Natl Acad Sci USA 1996;93:6025-30. 135.Grunau C, Clark SJ, Rosenthal A. Bisulfite genomic sequencing: systematic investigation of critical experimental parameters. Nucleic Acids Res 2001;29(13):e65. 136.Genereux DP, Johnson WC, Burden AF, Stöger R, Laird CD. Errors in the bisulfite conversion of DNA: modulating inappropriate- and failed-conversion frequencies. Nucleic Acids Res 2008;36(22):e150. 137.Tanaka K, Okamoto A. Degradation of DNA by bisulfite treatment. Bioorg Med Chem Lett 2007;17(7):1912-15. 138.Li X-T, Zhang Y, Chen GQ. Nanofibrous polyhydroxyalkanoate matrices as cell growth supporting materials. Biomaterials 2008;29:3720-28. 139.Bian, YZ, Wang Yang, Aibaidoula G, Chen GQ, Wu Q. Evaluation of poly(3-hydroxybutyrate-co-3hydroxyhexanoate) conduits for peripheral nerve regeneration. Biomaterials 2009;30:217-25. 140.Chen YC, Lee DC. Hsiao CY, Chung YF, Chen HC, Thomas JP. The effect of ultra-nanocrystalline diamond films on the proliferation and differentiation of neural stem cells. Biomaterials 2009;30:3428-35. 141.Christopherson GT, Song HJ, Mao HQ. Induction and regulation of differentiation in neural stem cells on ultra-crystalline diamond films. Biomaterials 30;556-64. 142.Chen YC, Lee DC, Tsai TY, Hsiao CY, Liu JW, Kao CY. Induction and regulation of differentiation in neural stem cells on ultra-crystalline diamond films. Biomaterials 2010;31:5575-87. 143.Kim H, Zahir T, Tator CH, Shoichet MS. Effects of dibutyryl cyclic-AMP on survival and neuronal differentiation of neural stem/progenitor cells transplanted into spinal cord injured rats. PLoS ONE 2011;6(6):e21744. 144.Amano S, Hazama F, Kawai J, Masakiyo S. Increased 5’-nucleotidase activity induced by dibutyryl cyclic AMP treatment of cultured glial cells. Brain Res 1999;506(2):254-58. 145.Fouse SD, Pellegrini M, Cole S, Meissner A, Van Neste L, Jaenisch R et al. Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3 K4/K27 trimethylation. Cell Stem Cell 2008;2:160-69. 146.Collas P, Noer A, Sørensen AL. Epigenetic basis for the differentiation potential of mesenchymal and embryonic stem cells. Transfus Med Hemother 2008;35:205-15. 147.Calella AM, Nervlov C, Lopez RG, Sciarretta C, von Bohlenund Halbach O, Bereshchenko O. Neurotrophin/Trk receptor signaling mediates C/EBPα, -ß and NeuroD recruitment to immediate-early gene promoters in neuronal cells and requires C/EBPs to induce immediate-early gene transcription. Neural Dev 2007;2:4.
|