|
Al-Sarraj, A., Day, R.M., and Thiel, G. (2005). Specificity of transcriptional regulation by the zinc finger transcription factors Sp1, Sp3, and Egr-1. J Cell Biochem 94, 153-167.
Amuthan, G., Biswas, G., Ananadatheerthavarada, H.K., Vijayasarathy, C., Shephard, H.M., and Avadhani, N.G. (2002). Mitochondrial stress-induced calcium signaling, phenotypic changes and invasive behavior in human lung carcinoma A549 cells. Oncogene 21, 7839-7849.
Arnould, T., Vankoningsloo, S., Renard, P., Houbion, A., Ninane, N., Demazy, C., Remacle, J., and Raes, M. (2002). CREB activation induced by mitochondrial dysfunction is a new signaling pathway that impairs cell proliferation. EMBO J 21, 53-63.
Arpa, J., Campos, Y., Gutierrez-Molina, M., Martin-Casanueva, M.A., Cruz-Martinez, A., Perez-Conde, M.C., Lopez-Pajares, R., Morales, M.C., Tatay, J., Lacasa, T., et al. (1997). Gene dosage effect in one family with myoclonic epilepsy and ragged-red fibers (MERRF). Acta Neurol Scand 96, 65-71.
Arya, R., Mallik, M., and Lakhotia, S.C. (2007). Heat shock genes - integrating cell survival and death. J Biosci 32, 595-610.
Bannister, A.J., and Kouzarides, T. (2011). Regulation of chromatin by histone modifications. Cell Res 21, 381-395.
Barth, N., Langmann, T., Scholmerich, J., Schmitz, G., and Schaffler, A. (2002). Identification of regulatory elements in the human adipose most abundant gene transcript-1 ( apM-1) promoter: role of SP1/SP3 and TNF-alpha as regulatory pathways. Diabetologia 45, 1425-1433.
Bergenhem, N.C., Hallberg, M., and Wisen, S. (1998). Molecular characterization of the human carbonic anhydrase-related protein (HCA-RP VIII). Biochim Biophys Acta 1384, 294-298.
Bindoff, L.A., Birch-Machin, M.A., Cartlidge, N.E., Parker, W.D., Jr., and Turnbull, D.M. (1991). Respiratory chain abnormalities in skeletal muscle from patients with Parkinson's disease. J Neurol Sci 104, 203-208.
Biswas, G., Adebanjo, O.A., Freedman, B.D., Anandatheerthavarada, H.K., Vijayasarathy, C., Zaidi, M., Kotlikoff, M., and Avadhani, N.G. (1999). Retrograde Ca2+ signaling in C2C12 skeletal myocytes in response to mitochondrial genetic and metabolic stress: a novel mode of inter-organelle crosstalk. EMBO J 18, 522-533.
Biswas, G., Anandatheerthavarada, H.K., and Avadhani, N.G. (2005). Mechanism of mitochondrial stress-induced resistance to apoptosis in mitochondrial DNA-depleted C2C12 myocytes. Cell Death Differ 12, 266-278.
Bouwman, P., and Philipsen, S. (2002). Regulation of the activity of Sp1-related transcription factors. Mol Cell Endocrinol 195, 27-38.
Chan, D.C. (2006). Mitochondria: dynamic organelles in disease, aging, and development. Cell 125, 1241-1252.
Chang, W.C., and Hung, J.J. (2012). Functional role of post-translational modifications of Sp1 in tumorigenesis. J Biomed Sci 19, 94.
Chen, C.Y., Chen, H.F., Gi, S.J., Chi, T.H., Cheng, C.K., Hsu, C.F., Ma, Y.S., Wei, Y.H., Liu, C.S., and Hsieh, M. (2011). Decreased heat shock protein 27 expression and altered autophagy in human cells harboring A8344G mitochondrial DNA mutation. Mitochondrion 11, 739-749.
Chen, H.F., Chen, C.Y., Lin, T.H., Huang, Z.W., Chi, T.H., Ma, Y.S., Wu, S.B., Wei, Y.H., and Hsieh, M. (2012). The protective roles of phosphorylated heat shock protein 27 in human cells harboring myoclonus epilepsy with ragged-red fibers A8344G mtDNA mutation. FEBS J 279, 2987-3001.
Chinnery, P.F., and Schon, E.A. (2003). Mitochondria. J Neurol Neurosurg Psychiatry 74, 1188-1199.
Chinnery, P.F., Turnbull, D.M., Howell, N., and Andrews, R.M. (1998). Mitochondrial DNA mutations and pathogenicity. J Med Genet 35, 701-702.
Chomyn, A., Meola, G., Bresolin, N., Lai, S.T., Scarlato, G., and Attardi, G. (1991). In vitro genetic transfer of protein synthesis and respiration defects to mitochondrial DNA-less cells with myopathy-patient mitochondria. Mol Cell Biol 11, 2236-2244.
Chu, C., Zavala, K., Fahimi, A., Lee, J., Xue, Q., Eilers, H., and Schumacher, M.A. (2011). Transcription factors Sp1 and Sp4 regulate TRPV1 gene expression in rat sensory neurons. Mol Pain 7, 44.
Concannon, C.G., Gorman, A.M., and Samali, A. (2003). On the role of Hsp27 in regulating apoptosis. Apoptosis 8, 61-70.
DiMauro, S., and Schon, E.A. (2003). Mitochondrial respiratory-chain diseases. N Engl J Med 348, 2656-2668.
Ding, H., Benotmane, A.M., Suske, G., Collen, D., and Belayew, A. (1999). Functional interactions between Sp1 or Sp3 and the helicase-like transcription factor mediate basal expression from the human plasminogen activator inhibitor-1 gene. J Biol Chem 274, 19573-19580.
Enriquez, J.A., Chomyn, A., and Attardi, G. (1995). MtDNA mutation in MERRF syndrome causes defective aminoacylation of tRNA(Lys) and premature translation termination. Nat Genet 10, 47-55.
Epstein, C.B., Waddle, J.A., Hale, W.t., Dave, V., Thornton, J., Macatee, T.L., Garner, H.R., and Butow, R.A. (2001). Genome-wide responses to mitochondrial dysfunction. Mol Biol Cell 12, 297-308.
Friedman, M.J., Li, S., and Li, X.J. (2009). Activation of gene transcription by heat shock protein 27 may contribute to its neuronal protection. J Biol Chem 284, 27944-27951.
Fukuhara, N., Tokiguchi, S., Shirakawa, K., and Tsubaki, T. (1980). Myoclonus epilepsy associated with ragged-red fibres (mitochondrial abnormalities): disease entity or a syndrome? Light-and electron-microscopic studies of two cases and review of literature. J Neurol Sci 47, 117-133.
Gartel, A.L., Goufman, E., Najmabadi, F., and Tyner, A.L. (2000). Sp1 and Sp3 activate p21 (WAF1/CIP1) gene transcription in the Caco-2 colon adenocarcinoma cell line. Oncogene 19, 5182-5188.
Hagen, G., Muller, S., Beato, M., and Suske, G. (1992). Cloning by recognition site screening of two novel GT box binding proteins: a family of Sp1 related genes. Nucleic Acids Res 20, 5519-5525.
Hewett-Emmett, D., and Tashian, R.E. (1996). Functional diversity, conservation, and convergence in the evolution of the alpha-, beta-, and gamma-carbonic anhydrase gene families. Mol Phylogenet Evol 5, 50-77.
Hirota, J., Ando, H., Hamada, K., and Mikoshiba, K. (2003). Carbonic anhydrase-related protein is a novel binding protein for inositol 1,4,5-trisphosphate receptor type 1. Biochem J 372, 435-441.
Huang, M.S., Wang, T.K., Liu, Y.W., Li, Y.T., Chi, T.H., Chou, C.W., and Hsieh, M. (2014). Roles of carbonic anhydrase 8 in neuronal cells and zebrafish. Biochim Biophys Acta 1840, 2829-2842.
James, A.M., Wei, Y.H., Pang, C.Y., and Murphy, M.P. (1996). Altered mitochondrial function in fibroblasts containing MELAS or MERRF mitochondrial DNA mutations. Biochem J 318 ( Pt 2), 401-407.
Jiao, Y., Yan, J., Zhao, Y., Donahue, L.R., Beamer, W.G., Li, X., Roe, B.A., Ledoux, M.S., and Gu, W. (2005). Carbonic anhydrase-related protein VIII deficiency is associated with a distinctive lifelong gait disorder in waddles mice. Genetics 171, 1239-1246.
Johar, K., Priya, A., Dhar, S., Liu, Q., and Wong-Riley, M.T. (2013). Neuron-specific specificity protein 4 bigenomically regulates the transcription of all mitochondria- and nucleus-encoded cytochrome c oxidase subunit genes in neurons. J Neurochem 127, 496-508.
Kaczynski, J., Cook, T., and Urrutia, R. (2003). Sp1- and Kruppel-like transcription factors. Genome Biol 4, 206.
Kato, K. (1990). Sequence of a novel carbonic anhydrase-related polypeptide and its exclusive presence in Purkinje cells. FEBS Lett 271, 137-140.
Kaya, N., Aldhalaan, H., Al-Younes, B., Colak, D., Shuaib, T., Al-Mohaileb, F., Al-Sugair, A., Nester, M., Al-Yamani, S., Al-Bakheet, A., et al. (2011). Phenotypical spectrum of cerebellar ataxia associated with a novel mutation in the CA8 gene, encoding carbonic anhydrase (CA) VIII. American journal of medical genetics Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 156B, 826-834.
Kennett, S.B., Udvadia, A.J., and Horowitz, J.M. (1997). Sp3 encodes multiple proteins that differ in their capacity to stimulate or repress transcription. Nucleic Acids Res 25, 3110-3117.
Lakkis, M.M., O'Shea, K.S., and Tashian, R.E. (1997). Differential expression of the carbonic anhydrase genes for CA VII (Car7) and CA-RP VIII (Car8) in mouse brain. J Histochem Cytochem 45, 657-662.
Lalonde, J., Saia, G., and Gill, G. (2014). Store-operated calcium entry promotes the degradation of the transcription factor Sp4 in resting neurons. Sci Signal 7, ra51.
Larsson, N.G., Tulinius, M.H., Holme, E., Oldfors, A., Andersen, O., Wahlstrom, J., and Aasly, J. (1992). Segregation and manifestations of the mtDNA tRNA(Lys) A-->G(8344) mutation of myoclonus epilepsy and ragged-red fibers (MERRF) syndrome. Am J Hum Genet 51, 1201-1212.
Lee, T.I., Johnstone, S.E., and Young, R.A. (2006). Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat Protoc 1, 729-748.
Leonard, J.V., and Schapira, A.H. (2000). Mitochondrial respiratory chain disorders I: mitochondrial DNA defects. Lancet 355, 299-304.
Li, L., He, S., Sun, J.M., and Davie, J.R. (2004). Gene regulation by Sp1 and Sp3. Biochem Cell Biol 82, 460-471.
Liu, Z., and Butow, R.A. (2006). Mitochondrial retrograde signaling. Annu Rev Genet 40, 159-185.
McBride, H.M., Neuspiel, M., and Wasiak, S. (2006). Mitochondria: more than just a powerhouse. Curr Biol 16, R551-560.
Noe, V., Chen, C., Alemany, C., Nicolas, M., Caragol, I., Chasin, L.A., and Ciudad, C.J. (1997). Cell-growth regulation of the hamster dihydrofolate reductase gene promoter by transcription factor Sp1. Eur J Biochem 249, 13-20.
Noer, A.S., Sudoyo, H., Lertrit, P., Thyagarajan, D., Utthanaphol, P., Kapsa, R., Byrne, E., and Marzuki, S. (1991). A tRNA(Lys) mutation in the mtDNA is the causal genetic lesion underlying myoclonic epilepsy and ragged-red fiber (MERRF) syndrome. Am J Hum Genet 49, 715-722.
Parikh, V.S., Morgan, M.M., Scott, R., Clements, L.S., and Butow, R.A. (1987). The mitochondrial genotype can influence nuclear gene expression in yeast. Science 235, 576-580.
Picaud, S.S., Muniz, J.R., Kramm, A., Pilka, E.S., Kochan, G., Oppermann, U., and Yue, W.W. (2009). Crystal structure of human carbonic anhydrase-related protein VIII reveals the basis for catalytic silencing. Proteins 76, 507-511.
Prestridge, D.S. (1995). Predicting Pol II promoter sequences using transcription factor binding sites. J Mol Biol 249, 923-932.
Ramos, B., Valin, A., Sun, X., and Gill, G. (2009). Sp4-dependent repression of neurotrophin-3 limits dendritic branching. Mol Cell Neurosci 42, 152-159.
Rosing, H.S., Hopkins, L.C., Wallace, D.C., Epstein, C.M., and Weidenheim, K. (1985). Maternally inherited mitochondrial myopathy and myoclonic epilepsy. Ann Neurol 17, 228-237.
Sapetschnig, A., Koch, F., Rischitor, G., Mennenga, T., and Suske, G. (2004). Complexity of translationally controlled transcription factor Sp3 isoform expression. J Biol Chem 279, 42095-42105.
Schapira, A.H. (2002). The "new" mitochondrial disorders. J Neurol Neurosurg Psychiatry 72, 144-149.
Schapira, A.H. (2006). Mitochondrial disease. Lancet 368, 70-82.
Sekito, T., Liu, Z., Thornton, J., and Butow, R.A. (2002). RTG-dependent mitochondria-to-nucleus signaling is regulated by MKS1 and is linked to formation of yeast prion [URE3]. Mol Biol Cell 13, 795-804.
Shaikh, S.B., and Nicholson, L.F. (2009). Effects of chronic low dose rotenone treatment on human microglial cells. Mol Neurodegener 4, 55.
Shoffner, J.M., Lott, M.T., Lezza, A.M., Seibel, P., Ballinger, S.W., and Wallace, D.C. (1990). Myoclonic epilepsy and ragged-red fiber disease (MERRF) is associated with a mitochondrial DNA tRNA(Lys) mutation. Cell 61, 931-937.
Shou, Y., Baron, S., and Poncz, M. (1998). An Sp1-binding silencer element is a critical negative regulator of the megakaryocyte-specific alphaIIb gene. J Biol Chem 273, 5716-5726.
Song, J., Mangold, M., Suske, G., Geltinger, C., Kanazawa, I., Sun, K., and Yokoyama, K.K. (2001). Characterization and promoter analysis of the mouse gene for transcription factor Sp4. Gene 264, 19-27.
Sowa, Y., Orita, T., Minamikawa-Hiranabe, S., Mizuno, T., Nomura, H., and Sakai, T. (1999). Sp3, but not Sp1, mediates the transcriptional activation of the p21/WAF1/Cip1 gene promoter by histone deacetylase inhibitor. Cancer Res 59, 4266-4270.
Suske, G. (1999). The Sp-family of transcription factors. Gene 238, 291-300.
Tan, N.Y., and Khachigian, L.M. (2009). Sp1 phosphorylation and its regulation of gene transcription. Mol Cell Biol 29, 2483-2488.
Taniuchi, K., Nishimori, I., Takeuchi, T., Ohtsuki, Y., and Onishi, S. (2002). cDNA cloning and developmental expression of murine carbonic anhydrase-related proteins VIII, X, and XI. Brain Res Mol Brain Res 109, 207-215.
Traven, A., Wong, J.M., Xu, D., Sopta, M., and Ingles, C.J. (2001). Interorganellar communication. Altered nuclear gene expression profiles in a yeast mitochondrial dna mutant. J Biol Chem 276, 4020-4027.
Turkmen, S., Guo, G., Garshasbi, M., Hoffmann, K., Alshalah, A.J., Mischung, C., Kuss, A., Humphrey, N., Mundlos, S., and Robinson, P.N. (2009). CA8 mutations cause a novel syndrome characterized by ataxia and mild mental retardation with predisposition to quadrupedal gait. PLoS Genet 5, e1000487.
Wallace, D.C. (2005). A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine. Annu Rev Genet 39, 359-407.
Wallace, D.C., Singh, G., Lott, M.T., Hodge, J.A., Schurr, T.G., Lezza, A.M., Elsas, L.J., 2nd, and Nikoskelainen, E.K. (1988). Mitochondrial DNA mutation associated with Leber's hereditary optic neuropathy. Science 242, 1427-1430.
Wang, T.K., Cheng, C.K., Chi, T.H., Ma, Y.S., Wu, S.B., Wei, Y.H., and Hsieh, M. (2014). Effects of carbonic anhydrase-related protein VIII on human cells harbouring an A8344G mitochondrial DNA mutation. Biochem J 459, 149-160.
Wang, T.K., Lin, Y.M., Lo, C.M., Tang, C.H., Teng, C.J., Chao, W.T., Wu, M.H., Liu, C.S., and Hsieh, M. (2015). Oncogenic roles of carbonic anhydrase 8 in human osteosarcoma cells. Tumour Biol.
Yoneda, M., Miyatake, T., and Attardi, G. (1994). Complementation of mutant and wild-type human mitochondrial DNAs coexisting since the mutation event and lack of complementation of DNAs introduced separately into a cell within distinct organelles. Mol Cell Biol 14, 2699-2712.
Yoshida, M., Kijima, M., Akita, M., and Beppu, T. (1990). Potent and specific inhibition of mammalian histone deacetylase both in vivo and in vitro by trichostatin A. J Biol Chem 265, 17174-17179.
Zhao, C., and Meng, A. (2005). Sp1-like transcription factors are regulators of embryonic development in vertebrates. Dev Growth Differ 47, 201-211.
Zhao, Q., Wang, J., Levichkin, I.V., Stasinopoulos, S., Ryan, M.T., and Hoogenraad, N.J. (2002). A mitochondrial specific stress response in mammalian cells. EMBO J 21, 4411-4419.
|