跳到主要內容

臺灣博碩士論文加值系統

(18.97.14.84) 您好!臺灣時間:2024/12/14 18:12
字體大小: 字級放大   字級縮小   預設字形  
回查詢結果 :::

詳目顯示

我願授權國圖
: 
twitterline
研究生:劉長軒
研究生(外文):Chang-Hsuan Liu
論文名稱:利用分子標誌輔助回交選育早熟之秈糯稻品系
論文名稱(外文):Breeding Early Maturing and Glutinous Lines of Indica Type Rice with Marker-Assisted Backcross Selection
指導教授:林順福
口試日期:2017-07-26
學位類別:碩士
校院名稱:國立臺灣大學
系所名稱:農藝學研究所
學門:農業科學學門
學類:一般農業學類
論文種類:學術論文
論文出版年:2017
畢業學年度:105
語文別:中文
論文頁數:55
中文關鍵詞:糯稻成熟期穎花數分子輔助回交
外文關鍵詞:Glutinous riceMaturitySpikelet numberMarker-assisted backcross
相關次數:
  • 被引用被引用:1
  • 點閱點閱:201
  • 評分評分:
  • 下載下載:0
  • 收藏至我的研究室書目清單書目收藏:0
為配合臺灣中南部輪作制度的需求,農民希望栽培具早熟特性的水稻品種,
然而現有的地方品種大陸秈雖具有早熟特性,所收穫稻穀卻需儲藏半年以上才可供加工利用,且國內目前無早熟秈糯品種。因此本研究之目的是將台稉糯1號
品種所具有的低糊化溫度(alk)、多穎花數(SPIKE)及糯性(wx)基因利用分子標誌
輔助回交育種的方法轉移至大陸秈品種,希望能選育早熟及適合加工用的秈糯稻優良品系。本研究成功篩選出與alk、SPIKE及wx等三個目標基因緊密連鎖的SSR分子標誌,其連鎖距離分別為0.12 cM、0.26 cM及3.66 cM;並由252組
標誌中篩選出49組具多型性且易判別的SSR分子標誌,即每對染色體至少有
4個分子標誌可供遺傳背景分析使用。本研究先利用2個目標基因之分子標誌
確認雜交成功的F1植株,接著進行87株 BC1F1植株的前景選拔及抽穗期和株高的外表性狀選拔,並且在278個BC2F1個體進行前景選拔及抽穗期、株高、穗數及主穗粒數等外表性狀選拔,共選獲10株優良BC2F1植株並自交以產生BC2F2種子,這些植株除了具有三個目標基因外,尚具有與輪迴親相近的稔實率,並無因秈稻與稉稻雜交所造成稔實率下降的問題。此外獲選植株中有9株與輪迴親
遺傳背景相似度低於85%,後續選獲品種可望以非實質衍生品種的條件申請品種權。本研究採用新提出的回交後代重組自交系的育種方法,即僅回交兩代並配合重要性狀外表性狀選拔超越輪迴親的品系,本研究結果初步證實此一育種方法的
有效性。
To fit for the rotation system in central and southern Taiwan, rice farmers prefer growing early maturing variety. Although there is an early maturing local variety available, Da-lu-xian, its grains need to be stored more than six months before procession. Thus, the purpose of this study was to transfer low gelatinization temperature (alk), high spikelet number (SPIKE), and glutinous (wx) genes from Taikeng Waxy No.1 variety to Da-lu-xian with marker-assisted backcross selection method and to select early maturing, suitable for processing, and glutinous lines of indica type rice. In this study, we successfully developed three SSR markers closely linked with target genes, alk, SPIKE and wx, respectively. Correspondingly genetic distances between markers and genes are 0.12 cM, 0.26 cM and 3.66 cM. We screened 49 polymorphic markers from 252 SSR markers and at least four markers for genetic background analysis were distributed on each chromosome. At first, we confirmed F1 hybrids with markers of two target genes and then performed foreground selection and phenotypic selection based on days to heading and plant height, for 87 BC1F1 plants. Then, we carried out foreground selection and phenotypic selection according to days to heading, plant height, spike number and grain number of principal spike, for 278 BC2F1 plants. Eventually, we selected ten superior BC2F1 plants to produce BC2F2 seeds. Besides possessing three target genes, these superior plants have normal fertility rates close to the recurrent parent. No decrease in fertility rate was found which often occurred in a cross between indica and japonica type rice. Furthermore, nine out of the ten selected plants had similarity less than 85% of genetic background in the recurrent parent providing qualification for plant variety right without the limit of essentially derived variety. In this study, we adopted a new breeding method of backcross recombinant lines. That is backcrossing twice and selecting lines superior to recurrent parent in terms of important traits. The effectiveness of the method has preliminarily proved according to the result of this study.
口試委員會審定書……………………………………………………………….………i
誌謝………………………………………………………………………………….…...ii
中文摘要………………………………………………………………………….……..iii
Abstract………………………………………………………………………………….iv
目錄…………………………………………………………………………….…...…...vi
表目錄…………………………………………………………………….…….………viii
圖目錄…………………………………………………………………………….……..ix
附圖表……………………………………………………………………………….…...x
一、 前言…………………………………………………………………….………...…1
二、 前人研究…………………………………………………………….……………...2
三、 材料與方法
(一) 試驗材料…...…………………………………………………….…………...4
(二) 分子標誌分析
1. DNA抽取…………………………………………….…………………....5
2. 引子(Primer)合成………………………………….………………………5
3. PCR及瓊脂膠電泳分析………………………………………………….6
(三) 遺傳距離估算…………………………………………….………..………...7
(四) 外表型測量…………………………….……………………………..……...7
(五) 遺傳組成估算……………………………….…………………………..…...8
(六) 糯性檢測…………………………………….…..…………………………...8
四、 結果
(一) 分子標誌篩選
1. 與ALK、SPIKE及Wx等三對目標基因連鎖分子標誌之篩選…...……9
2. 供遺傳背景分析分子標誌之篩選……………………………………….12
(二) 雜交與回交後代之選拔
1. 雜交產生F1種子及其鑑定…………..……………..………..…….…….14
2. BC1F1世代植株之選拔………………………………..………..…..…....15
3. BC2F1世代植株之選拔…………..……………………..………………...16
4. BC2F2世代種子之糯性檢測………..……………………....…….……...21
5. 綜合選拔結果.…..……..……………...……………….………………....23
(三) 雜交親本大陸秈品種遺傳純度之分析………………….…….……….......23
(四) RM17486與枝梗數關聯性之檢定………………………….….…………..24
五、 討論
(一) 分子標誌篩選.……………...…………………………………………...…..26
(二) 雜交與回交後代選拔…………………………………………………….....27
(三) 大陸秈非純系的可能影響……………………………………………..…...28
(四) 秈稉稻雜交後代稔實率問題………………………………………..……...28
(五) SPIKE基因對枝梗數的影響………………………………………..……...29
(六) 糯性偏離孟德爾分離率…………………………………………..………...29
(七) BRL與品種權…………………………………………………..…………..30
六、 結論……………………………………………………………………………….31
七、 參考文獻………………………………………………………………………….32
王聖善、陳榮坤、楊藹華、羅正宗 (2014) 臺灣常見稻種之產量相關等位基因型調查。 行政院農業委員會台南區農業改良場研究會報 64:56-72

林孟輝、林家偉、陳若竹、林育宗、 鄭舒允、劉宗華、詹富智、吳詩都、
曾富生、古新梅 (2007) 利用微衛星分子標誌偵測水稻耐旱基因QTL。
作物、環境與生物資訊 4:65-76

林崇正、李長沛、鄭舒允、林育宗、許愛娜、曾富生、吳詩都、古新梅 (2007) 利用水稻SSR分子標誌偵測影響米質的數量性狀基因座。作物、環境與生物資訊 4:269-284

陳正昇、陳榮坤、金漢煊、林彥蓉 (2010) 以分子輔助選種導入hd1、Hd6和ehd1抽穗期基因至水稻越光品種。作物、環境與生物資訊 7:1-20

郭婷玫、林順福、簡禎佑、丁文彥、林家玉、陳榮坤、廖大經 (2014) 利用分子
標誌輔助選拔水稻低白堊質品系。作物、環境與生物資訊 11:230-242

莊商路和郭金條 (1990) 稉型糯稻新品種─台稉糯1號。台南區農業改良場技術專刊農產-5

蔡世宗 (2015) 利用分子標誌輔助回交改良水稻之食味及米粒外觀品質。國立
臺灣大學農藝學系 碩士論文。台北市,臺灣

Ayres, N. M., A. M. McClung, P. D. Larkin, H. F. J. Bligh, C. A. Jones, W. D. Park (1997) Microsatellites and a single-nucleotide polymorphism differentiate apparent amylose classes in an extended pedigree of US rice germplasm. Theor. Appl. Genet. 100:280-284

Bao, J. S., Y. R. Wu, B. Hu, P. Wu, H. R. Cui, Q. Y. Shu (2002) QTL for rice grain quality based on a DH population derived from parents with similar apparent amylose content. Euphytica 128:317-324

Bao, J. S., M. Sun, L. H. Zhu, H. Corke (2004) Analysis of quantitative trait locus for some starch properties in rice (Oryza sativa L.), thermal properties, gel texture, swelling volume. J. Cereal Sci. 39:379-385

Bao, J. S., H. Corke and M. Sun (2006) Nucleotide diversity in starch synthase IIa and validation of single nucleotide polymorphisms in relation to starch gelatinization temperature and other physicochemical properties in rice (Oryza sativa L.).
Theor. Appl. Genet. 113:1171-1183

Basavaraj, S. H., V. K. Singh, A. Singh, A. Singh, A. Singh, S. Yadav, R. K. Ellur,
D. Singh, S. G. Krishnan, M. Nagarajan, T. Mohapatra, K. V. Prabhu, A. K. Singh (2010) Marker-assisted improvement of bacterial blight resistance in parental lines of Pusa RH10, a superfine grain aromatic rice hybrid. Mol. Breed. 26:293-305

Bason, M. L. and A. B. Blakeney (2007) Grain and grain products. P31-47 In Crosbie G. B. and Ross A. S. (eds) The RVA Handbook. American Association of Cereal Chemists International, St. Paul, USA

Caffagni, A., G. Albertazzi, G. Gavina, S. Ravaglia, A. Gianinetti, N. Pecchioni, J. Milc (2013) Characterization of an Italian rice germplasm collection with genetic markers useful for breeding to improve eating and cooking quality. Euphytica 194:383-399

Cagampang, G. B., C. M. Perez and B. O. Juliano (1973) A gel consistency test for eating quality of rice. J. Sci. Food Agr. 24:1589-1594

Doyle, J. J. and J. L. Doyle (1990) Isolation of plant DNA from fresh tissue. Focus 12:13-15

Fan, C. C., X. Q. Yu, Y. Z. Xing, C. G. Xu, L. J. Luo, Q. F. Zhang (2005) The main effects, epistatic effects and environmental interactions of QTLs on the cooking and eating quality of rice in a doubled haploid line population. Theor. Appl. Genet. 110:1445-1452

Fujita, D., A. G. Tagle, L. A. Ebron, Y. Fukuta, N. Kobayashi (2012) Characterization of near-isogenic lines carrying QTL for high spikelet number with the genetic background of an indica rice variety IR64 (Oryza sativa L.). Breed. Sci. 62(1):18-26

Fujita, D., K. R. Trijatmiko, A. G. Tagle, M. V. Sapasap, Y. Koide, K. Sasaki, N. Tsakirpaloglou, R. B. Gannaban, T. Nishimura, S. Yanagihara, Y. Fukuta, T. Koshiba, I. H. Slamet-Loedin, T. Ishimaru, N. Kobayashi (2013) NAL1 allele from a rice landrace greatly increases yield in modern indica cultivars.
Proc. Natl. Acad. Sci. 110(51):20431-20436

Gao, Z., D. Zeng, X. Cui, Y. Zhou, M. Yan, D. Huang, J. Li, Q. Qian (2003) Map-based cloning of the ALK gene, which controls the gelatinization temperature of rice.
Sci. China Ser. C. 46:661-668
.
Iftekharuddaula, K. M., M. A. Newaz, M. A. Salam, H. U. Ahmed, M. A. A. Mahbub, E. M. Septiningsih, B. C. Y. Collard, D. L. Sanchez, A. M. Pamplona, D. J. Mackill (2011) Rapid and high-precision marker assisted backcrossing to introgress the SUB1 QTL into BR11, the rainfed lowland rice mega variety of Bangladesh. Euphytica 178:83-97

Iftekharuddaula, K. M., H. U. Ahmed, S. Ghosal, Z. R. Moni, A. Amin, M. S. Ali (2015) Development of new submergence tolerant rice variety for Bangladesh using marker-assisted backcrossing. Rice Sci. 22:16-26

Jane, J., Y. Y. Chen, L. F. Lee, A. E. McPherson, K. S. Wong, M. Radosavljevic, T. Kasemsuwan (1999) Effects of amylopectin branch chain length and amylose content on the gelatinization and pasting properties of starch. Cereal Chem. 76(5):629-637

Jena, K. K. and D. J. Mackill (2008) Molecular markers and their use in marker-assisted selection in rice. Crop Sci. 48(4):1266-1276

Juliano, B. O. (1971) A simplified assay for milled-rice amylose. Cereal Sci. Today 16:334-338

Juliano, B. O. (1985) Criteria and tests for rice grain qualities. P443-524 In Juliano B. O. (ed) Rice Chemistry and Technology. The American Association of Cereal Chemists, St. Paul, USA

Kato, S., H. Kosaka, Y. Maruyama, Y. Takiguchi (1930) On the affinity of cultivated varieties of rice plants, Oryza sativa L. J. Dept. Agric., Kyushu Imper. Univ. Fukuoka 2:241-276.

Lee, G. H., I. K. Kang and K. M. Kim (2016) Mapping of novel QTL regulating grain shattering using doubled haploid population in Rice (Oryza sativa L.).
Int. J. Genomics:2128010

Little, R. R., G. B. Hilder and E. H. Dawson (1958) Differential effect of dilute alkali on 25 varieties of milled white rice. Cereal Chem. 35:111-126

Mikami, I., N. Uwatoko, Y. Ikeda, J. Yamaguchi, H. Y. Hirano, Y. Suzuki, Y. Sano (2008) Allelic diversification at the wx locus in landraces of Asian rice.
Theor. Appl. Genet. 116:979-989

Mutters, R. G. and J. F. Thompson (2009) Rice quality in the global market. P1-22 In Mutters, R. G. and Thompson J. F. (eds) Rice Quality Handbook ANR Publication University of California

Nakamura, Y., A. Sakurai, Y. Inaba, K. Kimura, N. Iwasawa, T. Nagamine (2002) The fine structure of amylopectin in endosperm from Asian cultivated rice can be largely classified into two classes. Starch Starke 54:117-131

Nakamura, Y., P. B. Francisco, Y. Hosaka, A. Sato, T. Sawada, A. Kubo, N. Fujita (2005) Essential amino acids of starch synthase IIa differentiate amylopectin structure and starch quality between japonica and indica rice varieties.
Plant Mol. Biol. 58:213-227

Ong, M.H. and J. M. V. Blanshard (1995) Texture determinants of cooked, parboiled rice. Physicochemical properties and leaching behaviour of rice. J. Cereal Sci. 21:261-269

Pandey, M.K., N. S. Rani, M. S. Madhav, R. M. Sundaram, G. S. Varaprasad, A. K. Sivaranjani, A. Bohra, G. R. Kumar, A. Kumar (2012) Different isoforms of starch-synthesizing enzymes controlling amylose and amylopectin content in rice (Oryza sativa L.). Biotechnol. Adv. 30:1697-1706

Preiss, J. and M. N. Sivak (1996) Starch synthesis in sinks and sources. P63-96 In: Zamski E. and Schaffter A. A. (eds) Photoassimilate Distribution in Plants and Crops: Sink–Source Relationships. Marcel Dekker, New York
Reflinur Kim, B., S. M. Jang, S. H. Chu, Y. Bordiya, M. B. Akter, J. Lee, J. H. Chin, H. J. Koh (2014) Analysis of segregation distortion and its relationship to hybrid barriers in rice. Rice 7:3

Sano, Y. (1984) Differential regulation of waxy gene expression in rice endosperm. Theor. Appl. Genet. 68:467-473

Sano, Y., M. Katsumata and K. Okuno (1986) Genetic studies of speciation in cultivated rice. Inter- and intraspecific differentiation in the waxy gene expression in rice. Euphytica 35:1-9

Sun, Y.Y., Y. LÜ, C. L. Dong, P. R. Wang, X. Q. Huang, X. J. Deng (2005) Genetic relationship among Wx gene, AC, GC and GT of rice. Acta Agr. Sin. 31:535-539

Umemoto, T., M. Yano, H. Satoh, A. Shomura, Y. Nakamura (2002) Mapping of a gene responsible for the difference in amylopectin structure between japonica-type and indica-type rice varietieheor. Appl. Genet. 104:1-8

Umemoto, T., N. Aoki, H. X. Lin, Y. Nakamura, N. Inouchi, Y. Sato, M. Yano, H. Hirabayashi, S. Maruyama (2004) Natural variation in rice starch synthase IIa affects enzyme and starch properties. Funct. Plant Biol. 31:671-684

Umemoto, T., T. Horibata, N. Aoki, M. Hiratsuka, M. Yano, N. Inouchi, N. (2008) Effects of variations in starch synthase on starch properties and eat1ing quality of rice. Plant Prod. Sci. 11(4):472-480
Wanchana, S., T. Toojinda, S. Tragoonrung, A. Vanavichit (2003) Duplicated coding sequence in the waxy allele of tropical glutinous rice (Oryza sativa L.).
Plant Sci. 165:1193-1199

Wang, Z.Y., F. Q. Zheng, G. Z. Shen, J. P. Gao, D. P. Snustad, M. G. Li, J. L. Zhang, M. M. Hong (1995) The amylose content in rice endosperm is related to the post-transcriptional regulation of the waxy gene. Plant J. 7:613-622

Yan, C., X. Li, R. Zhang, J. Sui, G. Liang, X. Shen, S. Gu, M. Gu (2005) Performance and inheritance of rice starch RVA profile characteristics. Rice Sci. 12(1):39-47

Gramene (n.d.) Information on all Class I SSRs.
retrieved from http://archive.gramene.org/markers/microsat/supp-table18.xls.

Oryzabase (n.d.) Chromosome and linkage maps:chromosome 6
retrieved from https://shigen.nig.ac.jp/rice/oryzabase/marker/mapNk/6
QRCODE
 
 
 
 
 
                                                                                                                                                                                                                                                                                                                                                                                                               
第一頁 上一頁 下一頁 最後一頁 top