|
1. Roger, V. L., Epidemiology of heart failure. Circ. Res. 2013, 113 (6), 646-659. 2. Fox, K. F.; Cowie, M. R.; Wood, D. A.; Coats, A. J. S.; Gibbs, J. S. R.; Underwood, S. R.; Turner, R. M.; Poole-Wilson, P. A.; Davies, S. W.; Sutton, G. C., Coronary artery disease as the cause of incident heart failure in the population. Eur. Heart J. 2001, 22 (3), 228-236. 3. McDonagh, T. A.; Metra, M.; Adamo, M.; Gardner, R. S.; Baumbach, A.; Bohm, M.; Burri, H.; Butler, J.; Celutkiene, J.; Chioncel, O.; Cleland, J. G. F.; Coats, A. J. S.; Crespo-Leiro, M. G.; Farmakis, D.; Gilard, M.; Heymans, S.; Hoes, A. W.; Jaarsma, T.; Jankowska, E. A.; Lainscak, M.; Lam, C. S. P.; Lyon, A. R.; McMurray, J. J. V.; Mebazaa, A.; Mindham, R.; Muneretto, C.; Francesco Piepoli, M.; Price, S.; Rosano, G. M. C.; Ruschitzka, F.; Kathrine Skibelund, A.; Group, E. S. C. S. D., 2021 ESC Guidelines for the diagnosis and treatment of acute and chronic heart failure. Eur. Heart J. 2021, 42 (36), 3599-3726. 4. Isomi, M.; Sadahiro, T.; Ieda, M., Progress and Challenge of Cardiac Regeneration to Treat Heart Failure. J. Cardiol. 2019, 73 (2), 97-101. 5. Pinilla-Vera, M.; Hahn, V. S.; Kass, D. A., Leveraging Signaling Pathways to Treat Heart Failure With Reduced Ejection Fraction. Circ. Res. 2019, 124 (11), 1618-1632. 6. Potter, L. R.; Yoder, A. R.; Flora, D. R.; Antos, L. K.; Dickey, D. M., Natriuretic peptides: their structures, receptors, physiologic functions and therapeutic applications. Handb. Exp. Pharmacol. 2009, (191), 341-366. 7. Fu, S.; Ping, P.; Wang, F.; Luo, L., Synthesis, secretion, function, metabolism and application of natriuretic peptides in heart failure. J. Biol. Eng. 2018, 12, 2. 8. Weber, M.; Hamm, C., Role of B-type natriuretic peptide (BNP) and NT-proBNP in clinical routine. Heart 2006, 92 (6), 843-849. 9. Lu, R. M.; Hwang, Y. C.; Liu, I. J.; Lee, C. C.; Tsai, H. Z.; Li, H. J.; Wu, H. C., Development of therapeutic antibodies for the treatment of diseases. J. Biomed. Sci. 2020, 27 (1), 1. 10. Crivianu-Gaita, V.; Thompson, M., Aptamers, antibody scFv, and antibody Fab' fragments: An overview and comparison of three of the most versatile biosensor biorecognition elements. Biosens. Bioelectron. 2016, 85, 32-45. 11. Ahmad, Z. A.; Yeap, S. K.; Ali, A. M.; Ho, W. Y.; Alitheen, N. B.; Hamid, M., scFv antibody: principles and clinical application. Clin. Dev. Immunol. 2012, 2012, 980250. 12. Anderson, G. P.; Liu, J. L.; Hale, M. L.; Bernstein, R. D.; Moore, M.; Swain, M. D.; Goldman, E. R., Development of Antiricin Single Domain Antibodies Toward Detection and Therapeutic Reagents. Analytical Chemistry 2008, 80 (24), 9604-9611. 13. Reverdatto, S.; Burz, D. S.; Shekhtman, A., Peptide aptamers: development and applications. Curr. Top. Med. Chem. 2015, 15 (12), 1082-1101. 14. Liu, Q.; Wang, J.; Boyd, B. J., Peptide-based biosensors. Talanta 2015, 136, 114-127. 15. Karimzadeh, A.; Hasanzadeh, M.; Shadjou, N.; Guardia, M. d. l., Peptide based biosensors. TrAC Trends in Analytical Chemistry 2018, 107, 1-20. 16. Barbosa, A. J. M.; Oliveira, A. R.; Roque, A. C. A., Protein- and Peptide-Based Biosensors in Artificial Olfaction. Trends Biotechnol. 2018, 36 (12), 1244-1258. 17. Hossein-Nejad-Ariani, H.; Kim, T.; Kaur, K., Peptide-Based Biosensor Utilizing Fluorescent Gold Nanoclusters for Detection of Listeria monocytogenes. ACS Applied Nano Materials 2018, 1 (7), 3389-3397. 18. Li, R.; Kang, G.; Hu, M.; Huang, H., Ribosome Display: A Potent Display Technology used for Selecting and Evolving Specific Binders with Desired Properties. Mol. Biotechnol. 2019, 61 (1), 60-71. 19. Pluckthun, A., Ribosome display: a perspective. Methods Mol. Biol. 2012, 805, 3-28. 20. Sidhu, S. S.; Lowman, H. B.; Cunningham, B. C.; Wells, J. A., Phage display for selection of novel binding peptides. Methods Enzymol. 2000, 328, 333-363. 21. Lee, S. Y.; Choi, J. H.; Xu, Z., Microbial cell-surface display. Trends in Biotechnology 2003, 21 (1), 45-52. 22. Weichhart, T.; Horky, M.; Söllner, J.; Gangl, S.; Henics, T.; Nagy, E.; Meinke, A.; von Gabain, A.; Fraser, C. M.; Gill, S. R.; Hafner, M.; von Ahsen, U., Functional selection of vaccine candidate peptides from Staphylococcus aureus whole-genome expression libraries in vitro. Infect. Immun. 2003, 71 (8), 4633-4641. 23. Josephson, K.; Hartman, M. C. T.; Szostak, J. W., Ribosomal Synthesis of Unnatural Peptides. J. Am. Chem. Soc. 2005, 127 (33), 11727-11735. 24. Douthwaite, J. A.; Groves, M. A.; Dufner, P.; Jermutus, L., An improved method for an efficient and easily accessible eukaryotic ribosome display technology. Protein Eng. Des. Sel. 2006, 19 (2), 85-90. 25. Matsuura, T.; Yanagida, H.; Ushioda, J.; Urabe, I.; Yomo, T., Nascent chain, mRNA, and ribosome complexes generated by a pure translation system. Biochem. Biophys. Res. Commun. 2007, 352 (2), 372-377. 26. Concepcion, J.; Witte, K.; Wartchow, C.; Choo, S.; Yao, D.; Persson, H.; Wei, J.; Li, P.; Heidecker, B.; Ma, W.; Varma, R.; Zhao, L.-S.; Perillat, D.; Carricato, G.; Recknor, M.; Du, K.; Ho, H.; Ellis, T.; Gamez, J.; Howes, M.; Phi-Wilson, J.; Lockard, S.; Zuk, R.; Tan, H., Label-Free Detection of Biomolecular Interactions Using BioLayer Interferometry for Kinetic Characterization. Combinatorial Chemistry & High Throughput Screening 2009, 12 (8), 791-800. 27. Sultana, A.; Lee, J. E., Measuring protein-protein and protein-nucleic Acid interactions by biolayer interferometry. Curr. Protoc. Protein. Sci. 2015, 79, 19.25.1-19.25.26. 28. Miller, W. L.; Grill, D. E.; Jaffe, A. S., Comparison of novel pro-BNP(1-108) and standard BNP assays in heart failure patients. Clin. Chim. Acta. 2012, 413 (9-10), 920-926. 29. Clerico, A.; Vittorini, S.; Passino, C., Measurement of the pro-hormone of brain type natriuretic peptide (proBNP): methodological considerations and pathophysiological relevance. Clin. Chem. Lab. Med. 2011, 49 (12), 1949-1954. 30. Macheret, F.; Boerrigter, G.; McKie, P.; Costello-Boerrigter, L.; Lahr, B.; Heublein, D.; Sandberg, S.; Ikeda, Y.; Cataliotti, A.; Bailey, K.; Rodeheffer, R.; Burnett, J. C., Jr., Pro-B-type natriuretic peptide(1-108) circulates in the general community: plasma determinants and detection of left ventricular dysfunction. J. Am. Coll. Cardiol. 2011, 57 (12), 1386-1395. 31. Dickey, D. M.; Potter, L. R., ProBNP(1-108) is resistant to degradation and activates guanylyl cyclase-A with reduced potency. Clin. Chem. 2011, 57 (9), 1272-1278. 32. Huang, T.-T.; Hwang, J.-K.; Chen, C.-H.; Chu, C.-S.; Lee, C.-W.; Chen, C.-C., (PS)2: protein structure prediction server version 3.0. Nucleic Acids Research 2015, 43 (W1), W338-W342. 33. Froger, A.; Hall, J. E., Transformation of plasmid DNA into E. coli using the heat shock method. J. Vis. Exp. 2007, (6), 253. 34. Taketo, A., DNA transfection of Escherichia coli by electroporation. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1988, 949 (3), 318-324. 35. Burgess, R. R., Chapter 17 Refolding Solubilized Inclusion Body Proteins. 2009, 463, 259-282. 36. Glynou, K.; Ioannou, P. C.; Christopoulos, T. K., One-step purification and refolding of recombinant photoprotein aequorin by immobilized metal-ion affinity chromatography. Protein Expression and Purification 2003, 27 (2), 384-390. 37. Yin, S.-M.; Zheng, Y.; Tien, P., On-column purification and refolding of recombinant bovine prion protein: using its octarepeat sequences as a natural affinity tag. Protein Expression and Purification 2003, 32 (1), 104-109. 38. Bradford, M. M., A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry 1976, 72 (1), 248-254. 39. Mahmood, T.; Yang, P. C., Western blot: technique, theory, and trouble shooting. N. Am. J. Med. Sc.i 2012, 4 (9), 429-434. 40. Dreier, B.; Pluckthun, A., Ribosome display: a technology for selecting and evolving proteins from large libraries. Methods Mol. Biol. 2011, 687, 283-306. 41. Stafford, R. L.; Matsumoto, M. L.; Yin, G.; Cai, Q.; Fung, J. J.; Stephenson, H.; Gill, A.; You, M.; Lin, S. H.; Wang, W. D.; Masikat, M. R.; Li, X.; Penta, K.; Steiner, A. R.; Baliga, R.; Murray, C. J.; Thanos, C. D.; Hallam, T. J.; Sato, A. K., In vitro Fab display: a cell-free system for IgG discovery. Protein Eng. Des. Sel. 2014, 27 (4), 97-109. 42. Chen, S.; Zhou, Y.; Chen, Y.; Gu, J., fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics 2018, 34 (17), i884-i890. 43. Bolger, A. M.; Lohse, M.; Usadel, B., Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 2014, 30 (15), 2114-2120. 44. Blankenberg, D.; Gordon, A.; Von Kuster, G.; Coraor, N.; Taylor, J.; Nekrutenko, A.; Galaxy, T., Manipulation of FASTQ data with Galaxy. Bioinformatics 2010, 26 (14), 1783-1785. 45. Pace, C. N.; Scholtz, J. M., A helix propensity scale based on experimental studies of peptides and proteins. Biophys. J. 1998, 75 (1), 422-427. 46. Syedbasha, M.; Linnik, J.; Santer, D.; O'Shea, D.; Barakat, K.; Joyce, M.; Khanna, N.; Tyrrell, D. L.; Houghton, M.; Egli, A., An ELISA Based Binding and Competition Method to Rapidly Determine Ligand-receptor Interactions. J. Vis. Exp. 2016, (109). 47. Eble, J. A., Titration ELISA as a Method to Determine the Dissociation Constant of Receptor Ligand Interaction. J. Vis. Exp. 2018, (132). 48. Goutelle, S.; Maurin, M.; Rougier, F.; Barbaut, X.; Bourguignon, L.; Ducher, M.; Maire, P., The Hill equation: a review of its capabilities in pharmacological modelling. Fundam. Clin. Pharmacol. 2008, 22 (6), 633-648. 49. Rosenfeld, J.; Capdevielle, J.; Guillemot, J. C.; Ferrara, P., In-gel digestion of proteins for internal sequence analysis after one- or two-dimensional gel electrophoresis. Analytical Biochemistry 1992, 203 (1), 173-179. 50. Lamiable, A.; Thévenet, P.; Rey, J.; Vavrusa, M.; Derreumaux, P.; Tufféry, P., PEP-FOLD3: faster de novo structure prediction for linear peptides in solution and in complex. Nucleic Acids Research 2016, 44 (W1), W449-W454. 51. Laigre, E.; Goyard, D.; Tiertant, C.; Dejeu, J.; Renaudet, O., The study of multivalent carbohydrate-protein interactions by bio-layer interferometry. Org. Biomol. Chem. 2018, 16 (46), 8899-8903. 52. Errington, W. J.; Bruncsics, B.; Sarkar, C. A., Mechanisms of noncanonical binding dynamics in multivalent protein-protein interactions. Proc. Natl. Acad. Sci. U. S. A. 2019, 116 (51), 25659-25667. 53. Fernandez-Villamarin, M.; Sousa-Herves, A.; Correa, J.; Munoz, E. M.; Taboada, P.; Riguera, R.; Fernandez-Megia, E., The Effect of PEGylation on Multivalent Binding: A Surface Plasmon Resonance and Isothermal Titration Calorimetry Study with Structurally Diverse PEG-Dendritic GATG Copolymers. ChemNanoMat 2016, 2 (5), 437-446. 54. Kim, Y. S.; Karisa, N.; Jeon, W. Y.; Lee, H.; Kim, Y. C.; Ahn, J., High-level production of N-terminal pro-brain natriuretic peptide, as a calibrant of heart failure diagnosis, in Escherichia coli. Appl. Microbiol. Biotechnol. 2019, 103 (12), 4779-4788. 55. Soleh, M. T.; Foo, J. Y.; Bailey, U. M.; Tan, N. Y.; Wan, Y.; Cooper-White, J.; Schulz, B. L.; Punyadeera, C., A rapid and cost-effective method of producing recombinant proBNP and NT-proBNP variants in Escherichia coli for immunoassay of heart failure. Biotechnol. Lett. 2014, 36 (1), 133-140. 56. Hammerling, M. J.; Fritz, B. R.; Yoesep, D. J.; Kim, D. S.; Carlson, E. D.; Jewett, M. C., In vitro ribosome synthesis and evolution through ribosome display. Nat. Commun. 2020, 11 (1), 1108. 57. Zimmermann, I.; Egloff, P.; Hutter, C. A. J.; Kuhn, B. T.; Brauer, P.; Newstead, S.; Dawson, R. J. P.; Geertsma, E. R.; Seeger, M. A., Generation of synthetic nanobodies against delicate proteins. Nat. Protoc. 2020, 15 (5), 1707-1741. 58. Crijns, H.; Adyns, L.; Ganseman, E.; Cambier, S.; Vandekerckhove, E.; Pörtner, N.; Vanbrabant, L.; Struyf, S.; Gerlza, T.; Kungl, A.; Proost, P., Affinity and Specificity for Binding to Glycosaminoglycans Can Be Tuned by Adapting Peptide Length and Sequence. International Journal of Molecular Sciences 2022, 23 (1). 59. González-Fernández, E.; Staderini, M.; Avlonitis, N.; Murray, A. F.; Mount, A. R.; Bradley, M., Effect of spacer length on the performance of peptide-based electrochemical biosensors for protease detection. Sensors and Actuators B 2018, 255, 3040-3046.
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